Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3659

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,260,255	-		Pf6N2E2_3658	0.27	+1.1
4,260,255	-		Pf6N2E2_3658	0.27	+1.1
4,260,277	-		Pf6N2E2_3658	0.29	-3.4
4,260,326	-		Pf6N2E2_3658	0.33	+0.1
4,260,339	-		Pf6N2E2_3658	0.34	-1.7
4,260,339	-		Pf6N2E2_3658	0.34	+1.1
4,260,372	-		Pf6N2E2_3658	0.37	+1.1
4,260,390	-		Pf6N2E2_3658	0.39	+1.1
4,260,760	-		Pf6N2E2_3658	0.71	+1.1
4,260,831	-		Pf6N2E2_3658	0.78	+1.1
4,260,831	-		Pf6N2E2_3658	0.78	+0.1
4,260,831	-		Pf6N2E2_3658	0.78	+0.1
4,260,834	+		Pf6N2E2_3658	0.78	+1.1
4,260,834	+		Pf6N2E2_3658	0.78	-2.8
4,260,834	+		Pf6N2E2_3658	0.78	-2.4
4,260,834	+		Pf6N2E2_3658	0.78	-2.3
4,260,834	+		Pf6N2E2_3658	0.78	-2.7
4,260,834	+		Pf6N2E2_3658	0.78	-3.1
4,260,834	+		Pf6N2E2_3658	0.78	-2.6
4,260,834	+				-1.8
4,260,834	+		Pf6N2E2_3658	0.78	-2.3
4,260,835	-		Pf6N2E2_3658	0.78	+1.1
4,260,835	-		Pf6N2E2_3658	0.78	-2.7
4,260,835	-		Pf6N2E2_3658	0.78	+1.1
4,260,835	-		Pf6N2E2_3658	0.78	+0.1
4,260,835	-		Pf6N2E2_3658	0.78	+1.1
4,260,835	-		Pf6N2E2_3658	0.78	-3.1
4,260,835	-		Pf6N2E2_3658	0.78	+1.1
4,260,835	-		Pf6N2E2_3658	0.78	+1.1
4,260,945	-		Pf6N2E2_3658	0.88	+0.1
4,260,998	+				+0.7
4,260,998	+				-1.9
4,260,998	+				-2.6
4,260,999	-				+0.1
4,260,999	-				-2.9
4,261,052	+				-2.6
4,261,053	-				-0.9
4,261,053	-				+0.1
4,261,105	+				+1.1
4,261,131	+				-0.7
4,261,177	+				-2.6
4,261,178	-				+1.1
4,261,202	-				-3.4
4,261,210	-				+1.1
4,261,220	-				+0.1
4,261,224	+				-3.6
4,261,225	-				-1.1
4,261,238	-				+1.1
4,261,238	-				-0.5
4,261,238	-				+1.1
4,261,238	-				+0.1
4,261,244	+		Pf6N2E2_3659	0.10	-2.4
4,261,245	-		Pf6N2E2_3659	0.10	+1.1
4,261,331	+		Pf6N2E2_3659	0.18	-0.8
4,261,331	+		Pf6N2E2_3659	0.18	-3.4
4,261,332	-		Pf6N2E2_3659	0.18	+1.1
4,261,332	-		Pf6N2E2_3659	0.18	-4.0
4,261,332	-		Pf6N2E2_3659	0.18	+1.1
4,261,332	-		Pf6N2E2_3659	0.18	+0.1
4,261,358	-		Pf6N2E2_3659	0.21	+1.1
4,261,358	-		Pf6N2E2_3659	0.21	-4.6
4,261,454	-		Pf6N2E2_3659	0.29	+1.1
4,261,752	+		Pf6N2E2_3659	0.56	-3.2
4,261,759	-		Pf6N2E2_3659	0.57	-3.2
4,261,759	-		Pf6N2E2_3659	0.57	+1.1
4,261,759	-		Pf6N2E2_3659	0.57	+1.1
4,261,759	-		Pf6N2E2_3659	0.57	+0.1
4,261,759	-		Pf6N2E2_3659	0.57	-0.5
4,261,759	-		Pf6N2E2_3659	0.57	+1.1
4,261,800	+		Pf6N2E2_3659	0.61	+1.1
4,262,000	+		Pf6N2E2_3659	0.79	-3.2
4,262,144	-				+1.1
4,262,144	-				+1.1
4,262,144	-				-3.9
4,262,147	+				-3.0
4,262,147	+				-3.2
4,262,147	+				-4.3
4,262,148	-				+1.1
4,262,148	-				+1.1
4,262,148	-				-3.6
4,262,148	-				-3.6
4,262,148	-				-3.5
4,262,148	-				+0.1
4,262,190	+				-4.2
4,262,190	+				-2.4
4,262,191	-				+1.1
4,262,191	-				-0.5
4,262,252	+				-1.4
4,262,264	-				+1.1
4,262,279	+				-1.6
4,262,279	+				-1.7
4,262,295	-				+1.1
4,262,376	-				-1.3
4,262,377	+				-1.9
4,262,377	+				-2.9
4,262,377	+				-2.2
4,262,412	+				-0.8
4,262,412	+				-1.6
4,262,417	+				-1.4
4,262,417	+				-0.1
4,263,097	+				-0.9
4,263,097	+				-0.3
4,263,097	+				+0.2
4,263,216	-		Pf6N2E2_3661	0.12	-6.0
4,263,216	-		Pf6N2E2_3661	0.12	-5.7
4,263,216	-		Pf6N2E2_3661	0.12	-4.4