Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2803

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
3,288,686	+		Pf6N2E2_2802	0.29	-0.7
3,288,686	+		Pf6N2E2_2802	0.29	+1.0
3,288,686	+		Pf6N2E2_2802	0.29	-0.9
3,288,686	+		Pf6N2E2_2802	0.29	-0.9
3,288,686	+		Pf6N2E2_2802	0.29	-0.0
3,288,687	-		Pf6N2E2_2802	0.29	+1.0
3,288,687	-		Pf6N2E2_2802	0.29	-0.0
3,288,687	-		Pf6N2E2_2802	0.29	-0.8
3,288,771	-		Pf6N2E2_2802	0.36	+1.0
3,288,771	-		Pf6N2E2_2802	0.36	-0.6
3,288,896	+		Pf6N2E2_2802	0.47	+1.0
3,288,896	+		Pf6N2E2_2802	0.47	-0.0
3,288,896	+		Pf6N2E2_2802	0.47	-1.3
3,288,896	+		Pf6N2E2_2802	0.47	-1.0
3,288,896	+		Pf6N2E2_2802	0.47	-0.0
3,288,896	+		Pf6N2E2_2802	0.47	-0.7
3,288,896	+		Pf6N2E2_2802	0.47	+1.0
3,288,896	+		Pf6N2E2_2802	0.47	-0.2
3,288,897	-		Pf6N2E2_2802	0.47	+1.0
3,288,897	-		Pf6N2E2_2802	0.47	+1.0
3,289,145	+		Pf6N2E2_2802	0.69	-0.0
3,289,146	-		Pf6N2E2_2802	0.69	+1.0
3,289,146	-		Pf6N2E2_2802	0.69	+1.0
3,289,146	-		Pf6N2E2_2802	0.69	-0.6
3,289,554	+				-0.6
3,289,659	+				-0.4
3,289,659	+				+1.0
3,289,944	+		Pf6N2E2_2803	0.30	-0.9
3,289,945	-		Pf6N2E2_2803	0.30	-1.7
3,290,074	-		Pf6N2E2_2803	0.42	-0.0
3,290,074	-		Pf6N2E2_2803	0.42	+1.0
3,290,074	-		Pf6N2E2_2803	0.42	-0.3
3,290,193	+		Pf6N2E2_2803	0.54	-0.0
3,290,193	+		Pf6N2E2_2803	0.54	-0.8
3,290,379	+		Pf6N2E2_2803	0.72	-0.6
3,290,380	-		Pf6N2E2_2803	0.72	-0.6
3,290,380	-		Pf6N2E2_2803	0.72	-0.3
3,290,380	-		Pf6N2E2_2803	0.72	+0.4
3,290,380	-		Pf6N2E2_2803	0.72	-0.0
3,290,394	+		Pf6N2E2_2803	0.74	+1.0
3,290,517	+		Pf6N2E2_2803	0.86	-1.2
3,290,517	+		Pf6N2E2_2803	0.86	+1.0
3,290,518	-		Pf6N2E2_2803	0.86	-0.0
3,290,559	+				+1.0
3,290,559	+				+1.0
3,290,560	-				-0.6
3,290,681	-				-0.6
3,290,921	+		Pf6N2E2_2804	0.27	+1.0
3,290,921	+		Pf6N2E2_2804	0.27	-0.0
3,290,921	+		Pf6N2E2_2804	0.27	+1.0
3,290,922	-		Pf6N2E2_2804	0.28	-0.6
3,290,972	+		Pf6N2E2_2804	0.42	-0.0
3,290,972	+		Pf6N2E2_2804	0.42	+0.2
3,290,972	+		Pf6N2E2_2804	0.42	-0.6
3,290,972	+		Pf6N2E2_2804	0.42	+1.0
3,290,972	+		Pf6N2E2_2804	0.42	+1.0
3,290,973	-		Pf6N2E2_2804	0.42	+0.4
3,290,973	-		Pf6N2E2_2804	0.42	-1.1
3,290,973	-		Pf6N2E2_2804	0.42	-0.0
3,291,005	+		Pf6N2E2_2804	0.52	+1.0
3,291,005	+		Pf6N2E2_2804	0.52	-0.3
3,291,005	+		Pf6N2E2_2804	0.52	+1.0
3,291,074	+		Pf6N2E2_2804	0.72	-0.9
3,291,074	+		Pf6N2E2_2804	0.72	+1.0
3,291,074	+		Pf6N2E2_2804	0.72	-0.5
3,291,074	+		Pf6N2E2_2804	0.72	-0.0
3,291,074	+		Pf6N2E2_2804	0.72	+1.0
3,291,074	+		Pf6N2E2_2804	0.72	-0.0
3,291,075	-		Pf6N2E2_2804	0.72	-0.0
3,291,075	-		Pf6N2E2_2804	0.72	+1.0
3,291,075	-		Pf6N2E2_2804	0.72	-0.9
3,291,075	-				+1.0
3,291,075	-		Pf6N2E2_2804	0.72	-0.2
3,291,119	-		Pf6N2E2_2804	0.85	+1.0
3,291,208	+				-0.5
3,291,208	+				-0.2
3,291,251	+				+1.0
3,291,251	+				+1.0
3,291,252	-				-0.3
3,291,252	-				-0.6
3,291,252	-				-0.0
3,291,252	-				-0.2
3,291,252	-				+1.0
3,291,254	+				-1.0
3,291,254	+				-0.0
3,291,254	+				+1.0
3,291,254	+				+0.0
3,291,254	+				+1.0
3,291,254	+				+1.0
3,291,254	+				-0.8
3,291,254	+				-0.0
3,291,255	-				-0.0
3,291,255	-				-0.0
3,291,255	-				+1.0
3,291,255	-				-0.4
3,291,255	-				+1.0
3,291,255	-				-0.9
3,291,255	-				-0.0
3,291,255	-				-0.6
3,291,255	-				-0.0
3,291,255	-				-0.0
3,291,376	-		Pf6N2E2_2805	0.21	-0.0
3,291,377	+		Pf6N2E2_2805	0.21	+1.0
3,291,377	+		Pf6N2E2_2805	0.21	-0.5
3,291,377	+		Pf6N2E2_2805	0.21	-0.0
3,291,377	+		Pf6N2E2_2805	0.21	-0.0
3,291,377	+		Pf6N2E2_2805	0.21	-0.5
3,291,377	+		Pf6N2E2_2805	0.21	-1.6
3,291,377	+		Pf6N2E2_2805	0.21	+1.0
3,291,377	+		Pf6N2E2_2805	0.21	+1.0
3,291,377	+		Pf6N2E2_2805	0.21	-0.0
3,291,377	+		Pf6N2E2_2805	0.21	+1.0
3,291,378	-		Pf6N2E2_2805	0.21	-1.8
3,291,378	-		Pf6N2E2_2805	0.21	-0.6
3,291,378	-		Pf6N2E2_2805	0.21	-0.5
3,291,378	-		Pf6N2E2_2805	0.21	-0.0
3,291,378	-		Pf6N2E2_2805	0.21	+1.0
3,291,378	-		Pf6N2E2_2805	0.21	+1.0
3,291,378	-		Pf6N2E2_2805	0.21	+1.0
3,291,378	-		Pf6N2E2_2805	0.21	+1.0
3,291,554	+		Pf6N2E2_2805	0.52	-0.4
3,291,555	-		Pf6N2E2_2805	0.52	-0.0
3,291,594	-		Pf6N2E2_2805	0.59	-0.0
3,291,659	+		Pf6N2E2_2805	0.70	+0.3
3,291,659	+		Pf6N2E2_2805	0.70	-0.0
3,291,659	+		Pf6N2E2_2805	0.70	-0.0
3,291,659	+		Pf6N2E2_2805	0.70	-0.0
3,291,659	+		Pf6N2E2_2805	0.70	-0.7
3,291,659	+		Pf6N2E2_2805	0.70	+1.0
3,291,659	+		Pf6N2E2_2805	0.70	-0.6
3,291,660	-		Pf6N2E2_2805	0.70	-0.1
3,291,660	-		Pf6N2E2_2805	0.70	-0.0
3,291,660	-		Pf6N2E2_2805	0.70	-1.0
3,291,660	-		Pf6N2E2_2805	0.70	-0.6