Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2701

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
3,194,189	-		Pf6N2E2_2700	0.23	-0.0
3,194,373	-		Pf6N2E2_2700	0.42	+1.0
3,194,373	-		Pf6N2E2_2700	0.42	-0.2
3,194,373	-		Pf6N2E2_2700	0.42	+0.7
3,194,373	-		Pf6N2E2_2700	0.42	-0.0
3,194,522	+		Pf6N2E2_2700	0.57	-0.5
3,194,522	+		Pf6N2E2_2700	0.57	-0.6
3,194,522	+		Pf6N2E2_2700	0.57	-1.4
3,194,522	+		Pf6N2E2_2700	0.57	+1.0
3,194,522	+		Pf6N2E2_2700	0.57	-0.2
3,194,523	-		Pf6N2E2_2700	0.57	-1.9
3,194,523	-		Pf6N2E2_2700	0.57	+1.0
3,194,678	+		Pf6N2E2_2700	0.73	-0.0
3,194,678	+		Pf6N2E2_2700	0.73	-1.0
3,194,679	-		Pf6N2E2_2700	0.73	-0.0
3,194,679	-		Pf6N2E2_2700	0.73	-0.0
3,194,898	+				+1.0
3,194,898	+				-0.0
3,194,899	-				+1.0
3,194,899	-				+1.0
3,194,899	-				+1.0
3,194,899	-				+1.0
3,194,929	+				-0.8
3,194,930	-				-1.0
3,194,931	+				+1.0
3,194,931	+				-0.6
3,194,931	+				-0.0
3,194,931	+				-2.1
3,194,931	+				-0.6
3,194,932	-				-0.0
3,194,932	-				+1.0
3,194,932	-				-1.1
3,194,932	-				-0.0
3,194,932	-				-0.0
3,194,932	-				+1.0
3,194,932	-				-0.0
3,194,968	+				-0.6
3,194,969	-				-0.0
3,194,982	+				+1.0
3,194,982	+				-1.6
3,194,983	-				-0.0
3,195,048	+				-0.5
3,195,048	+				+1.0
3,195,048	+				-1.6
3,195,049	-				+1.0
3,195,049	-				-0.6
3,195,049	-				-0.0
3,195,169	+				+2.5
3,195,170	-				-0.5
3,195,370	+		Pf6N2E2_2701	0.26	+1.0
3,195,610	+		Pf6N2E2_2701	0.49	+1.0
3,195,611	-		Pf6N2E2_2701	0.49	+1.0
3,195,611	-		Pf6N2E2_2701	0.49	-1.3
3,195,802	+		Pf6N2E2_2701	0.67	-1.2
3,195,880	+		Pf6N2E2_2701	0.74	-0.6
3,195,880	+		Pf6N2E2_2701	0.74	-0.6
3,195,881	-		Pf6N2E2_2701	0.74	-0.6
3,196,153	+				-1.4
3,196,153	+				-0.0
3,196,154	-				-0.6
3,196,154	-				+0.6
3,196,269	+		Pf6N2E2_2702	0.22	+1.0
3,196,289	+		Pf6N2E2_2702	0.26	+1.0
3,196,290	-		Pf6N2E2_2702	0.26	+1.1
3,196,290	-		Pf6N2E2_2702	0.26	-1.0
3,196,290	-		Pf6N2E2_2702	0.26	-0.0
3,196,290	-		Pf6N2E2_2702	0.26	-0.6
3,196,380	-		Pf6N2E2_2702	0.44	-0.3
3,196,423	+		Pf6N2E2_2702	0.52	+1.0
3,196,424	-		Pf6N2E2_2702	0.52	-1.4
3,196,424	-		Pf6N2E2_2702	0.52	+1.0
3,196,424	-		Pf6N2E2_2702	0.52	+1.0
3,196,848	+				+1.0
3,196,848	+				-0.0
3,196,849	-				+1.0
3,196,853	-				-0.4
3,196,853	-				-1.4
3,196,866	+				+1.0
3,196,867	-				-0.0
3,196,870	+				-0.3
3,196,870	+				+1.5
3,196,870	+				-0.0
3,196,871	-				-1.0
3,196,871	-				-0.4
3,196,873	+				+1.0
3,196,873	+				+0.7
3,196,874	-				-0.6
3,196,874	-				-1.5
3,196,874	-				-0.4
3,196,874	-				+1.0
3,196,874	-				-1.1
3,196,915	-				-0.0
3,196,969	+				+1.0
3,196,969	+				-0.8
3,196,970	-				+1.0
3,196,970	-				-1.4
3,196,970	-				-0.6
3,196,970	-				-0.6
3,197,008	+				+1.0
3,197,009	-				-0.6
3,197,021	+				-0.0
3,197,021	+				+1.0
3,197,021	+				+1.0
3,197,022	-				-0.7
3,197,022	-				+1.0
3,197,022	-				+1.0
3,197,022	-				+1.0
3,197,025	+				-0.0
3,197,025	+				-0.0
3,197,026	-				-0.1
3,197,103	+				-0.6
3,197,104	-				-0.0