Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2249

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
2,662,308	+		Pf6N2E2_2248	0.38	-0.1
2,662,308	+		Pf6N2E2_2248	0.38	+0.9
2,662,308	+		Pf6N2E2_2248	0.38	-0.2
2,662,308	+		Pf6N2E2_2248	0.38	-0.1
2,662,308	+		Pf6N2E2_2248	0.38	+0.9
2,662,308	+		Pf6N2E2_2248	0.38	+0.9
2,662,308	+		Pf6N2E2_2248	0.38	-0.6
2,662,308	+		Pf6N2E2_2248	0.38	-0.1
2,662,308	+		Pf6N2E2_2248	0.38	-0.1
2,662,309	-		Pf6N2E2_2248	0.38	-1.4
2,662,309	-		Pf6N2E2_2248	0.38	-0.3
2,662,309	-		Pf6N2E2_2248	0.38	+0.7
2,662,309	-		Pf6N2E2_2248	0.38	+0.9
2,662,309	-		Pf6N2E2_2248	0.38	+0.9
2,662,309	-		Pf6N2E2_2248	0.38	+0.9
2,662,309	-		Pf6N2E2_2248	0.38	+0.1
2,662,365	-		Pf6N2E2_2248	0.42	+2.8
2,662,540	-		Pf6N2E2_2248	0.53	+0.9
2,662,666	-		Pf6N2E2_2248	0.62	-0.4
2,662,722	+		Pf6N2E2_2248	0.65	+0.9
2,662,722	+		Pf6N2E2_2248	0.65	-0.1
2,662,722	+		Pf6N2E2_2248	0.65	+0.9
2,662,722	+		Pf6N2E2_2248	0.65	-0.1
2,662,722	+		Pf6N2E2_2248	0.65	-0.4
2,662,723	-		Pf6N2E2_2248	0.65	-1.9
2,662,723	-		Pf6N2E2_2248	0.65	+0.9
2,662,723	-		Pf6N2E2_2248	0.65	+0.9
2,662,723	-		Pf6N2E2_2248	0.65	+0.9
2,662,723	-		Pf6N2E2_2248	0.65	+0.6
2,662,723	-		Pf6N2E2_2248	0.65	-1.1
2,662,723	-		Pf6N2E2_2248	0.65	-0.1
2,662,723	-		Pf6N2E2_2248	0.65	-1.1
2,662,791	+		Pf6N2E2_2248	0.70	+0.9
2,662,792	-		Pf6N2E2_2248	0.70	-1.6
2,662,792	-		Pf6N2E2_2248	0.70	+0.9
2,662,946	-		Pf6N2E2_2248	0.80	-0.6
2,662,946	-		Pf6N2E2_2248	0.80	-0.6
2,663,019	+		Pf6N2E2_2248	0.85	-0.6
2,663,019	+		Pf6N2E2_2248	0.85	-0.8
2,663,020	-		Pf6N2E2_2248	0.85	+1.2
2,663,020	-		Pf6N2E2_2248	0.85	-0.3
2,663,020	-		Pf6N2E2_2248	0.85	+0.9
2,663,236	+				+0.9
2,663,369	+				-0.9
2,663,516	+		Pf6N2E2_2249	0.21	+0.9
2,663,578	+		Pf6N2E2_2249	0.25	+0.3
2,663,578	+		Pf6N2E2_2249	0.25	+0.9
2,663,579	-		Pf6N2E2_2249	0.26	+0.8
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,614	+		Pf6N2E2_2249	0.28	+0.9
2,663,615	-		Pf6N2E2_2249	0.28	-1.1
2,663,615	-		Pf6N2E2_2249	0.28	+0.9
2,663,615	-		Pf6N2E2_2249	0.28	+0.9
2,663,615	-		Pf6N2E2_2249	0.28	+1.9
2,663,615	-		Pf6N2E2_2249	0.28	-1.1
2,663,615	-		Pf6N2E2_2249	0.28	-0.1
2,663,813	-		Pf6N2E2_2249	0.44	+1.4
2,663,857	+		Pf6N2E2_2249	0.48	-0.1
2,663,858	-		Pf6N2E2_2249	0.48	-0.4
2,663,858	-		Pf6N2E2_2249	0.48	-0.6
2,663,858	-		Pf6N2E2_2249	0.48	+0.9
2,663,882	-		Pf6N2E2_2249	0.50	+0.9
2,663,912	+		Pf6N2E2_2249	0.52	+0.9
2,663,938	-		Pf6N2E2_2249	0.54	+0.9
2,663,965	+		Pf6N2E2_2249	0.56	-0.5
2,663,965	+		Pf6N2E2_2249	0.56	+1.5
2,663,966	-		Pf6N2E2_2249	0.56	-0.6
2,664,335	+		Pf6N2E2_2249	0.85	+0.4
2,664,336	-		Pf6N2E2_2249	0.86	+1.6
2,664,345	-		Pf6N2E2_2249	0.86	+0.9
2,664,413	+				+0.9
2,664,413	+				-1.8
2,664,413	+				+0.9
2,664,414	-				-1.1
2,664,433	+				+0.9
2,664,498	+				-0.1
2,664,499	-				-0.5
2,664,539	+				+0.9
2,664,539	+				-0.3
2,664,540	-				+0.9
2,664,540	-				-0.1
2,664,540	-				-2.1
2,664,567	+				+0.9
2,664,568	-				+0.9
2,664,585	+				-0.1
2,664,585	+				+0.9
2,664,585	+				-0.1
2,664,604	+				+0.9
2,664,604	+				+0.9
2,664,604	+				+0.9
2,664,605	-				-1.1
2,664,605	-				-0.1
2,664,662	+				-0.1
2,664,662	+				-0.6
2,664,683	-				+0.9
2,664,892	+		Pf6N2E2_2250	0.16	+0.9
2,664,893	-		Pf6N2E2_2250	0.17	+0.9
2,664,893	-		Pf6N2E2_2250	0.17	-0.1
2,664,959	+		Pf6N2E2_2250	0.24	+0.9
2,665,119	+		Pf6N2E2_2250	0.40	-0.3
2,665,174	+		Pf6N2E2_2250	0.46	-0.1
2,665,175	-		Pf6N2E2_2250	0.46	-0.1
2,665,334	-		Pf6N2E2_2250	0.63	-0.6
2,665,415	-		Pf6N2E2_2250	0.72	+0.9
2,665,436	+		Pf6N2E2_2250	0.74	+0.9
2,665,437	-		Pf6N2E2_2250	0.74	+0.3
2,665,437	-		Pf6N2E2_2250	0.74	-0.1
2,665,437	-		Pf6N2E2_2250	0.74	+0.9
2,665,437	-		Pf6N2E2_2250	0.74	-0.6