Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1981

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
2,346,023	+		Pf6N2E2_1979	0.80	-1.1
2,346,023	+		Pf6N2E2_1979	0.80	+0.2
2,346,024	-		Pf6N2E2_1979	0.80	+0.3
2,346,024	-		Pf6N2E2_1979	0.80	-0.2
2,346,024	-		Pf6N2E2_1979	0.80	-0.7
2,346,024	-		Pf6N2E2_1979	0.80	+0.9
2,346,150	+		Pf6N2E2_1979	0.90	+0.9
2,346,150	+		Pf6N2E2_1979	0.90	+0.9
2,346,211	+				+0.3
2,346,237	+				-0.1
2,346,237	+				-0.1
2,346,237	+				-0.7
2,346,238	-				-0.1
2,346,319	+				-0.1
2,346,319	+				+0.9
2,346,319	+				-0.1
2,346,455	+				+0.8
2,346,527	-		Pf6N2E2_1980	0.11	-0.7
2,346,557	-		Pf6N2E2_1980	0.19	+0.9
2,346,559	+		Pf6N2E2_1980	0.19	-0.1
2,346,559	+		Pf6N2E2_1980	0.19	-0.1
2,346,560	-		Pf6N2E2_1980	0.19	+0.9
2,346,617	+		Pf6N2E2_1980	0.33	+0.9
2,346,634	+		Pf6N2E2_1980	0.38	-0.1
2,346,732	+		Pf6N2E2_1980	0.62	+0.9
2,346,735	+		Pf6N2E2_1980	0.62	+0.9
2,346,736	-		Pf6N2E2_1980	0.63	+0.1
2,346,736	-		Pf6N2E2_1980	0.63	+0.9
2,346,738	+		Pf6N2E2_1980	0.63	+0.9
2,346,738	+		Pf6N2E2_1980	0.63	-1.1
2,346,738	+		Pf6N2E2_1980	0.63	+0.9
2,346,738	+		Pf6N2E2_1980	0.63	-0.1
2,346,738	+		Pf6N2E2_1980	0.63	+0.9
2,346,739	-		Pf6N2E2_1980	0.63	+0.9
2,346,828	+		Pf6N2E2_1980	0.85	-0.7
2,346,850	+				-0.1
2,346,850	+				-0.7
2,346,872	+				-1.1
2,346,873	-				+0.9
2,346,884	+				+0.9
2,347,036	+				-0.7
2,347,066	+		Pf6N2E2_1981	0.12	-0.1
2,347,115	+		Pf6N2E2_1981	0.22	+0.9
2,347,115	+		Pf6N2E2_1981	0.22	-0.1
2,347,116	-		Pf6N2E2_1981	0.22	+0.9
2,347,205	+		Pf6N2E2_1981	0.41	-0.7
2,347,298	-		Pf6N2E2_1981	0.60	+0.9
2,347,392	+		Pf6N2E2_1981	0.79	-0.1
2,347,434	+		Pf6N2E2_1981	0.88	-0.1
2,347,435	-		Pf6N2E2_1981	0.88	+0.9
2,347,572	+				-0.1
2,347,572	+				+0.9
2,347,573	-				-0.7
2,347,731	-				+0.9
2,347,927	+				-0.9
2,347,927	+				-0.1
2,347,966	-				+0.9
2,347,966	-				+0.9
2,348,020	+				+0.9
2,348,032	-				-0.3
2,348,032	-				-0.6
2,348,032	-				-2.1
2,348,078	+				+0.9
2,348,100	+				+1.5
2,348,101	-				-0.9
2,348,112	-				+0.9
2,348,189	+				-1.5
2,348,189	+				+0.9
2,348,190	-				+0.9
2,348,233	+				+0.9
2,348,234	-				-0.7
2,348,234	-				-0.4
2,348,252	-				-0.2
2,348,371	+				+0.2
2,348,371	+				+0.9
2,348,372	-				+0.9
2,348,372	-				-0.1
2,348,372	-				+0.9