Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1749

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
2,062,003	+		Pf6N2E2_1748	0.39	+0.9
2,062,003	+		Pf6N2E2_1748	0.39	+0.9
2,062,004	-		Pf6N2E2_1748	0.39	-0.7
2,062,004	-		Pf6N2E2_1748	0.39	-0.6
2,062,049	-		Pf6N2E2_1748	0.43	-0.7
2,062,203	-		Pf6N2E2_1748	0.56	-0.1
2,062,435	+		Pf6N2E2_1748	0.76	-0.7
2,062,435	+		Pf6N2E2_1748	0.76	-0.1
2,062,435	+		Pf6N2E2_1748	0.76	-2.0
2,062,435	+		Pf6N2E2_1748	0.76	+0.9
2,062,436	-		Pf6N2E2_1748	0.76	-0.5
2,062,436	-		Pf6N2E2_1748	0.76	+0.9
2,062,436	-		Pf6N2E2_1748	0.76	+0.9
2,062,439	-		Pf6N2E2_1748	0.76	-0.5
2,062,439	-		Pf6N2E2_1748	0.76	+0.9
2,062,504	+		Pf6N2E2_1748	0.82	-0.3
2,062,731	+				-0.1
2,062,768	+				-0.1
2,063,032	-		Pf6N2E2_1749	0.25	-0.1
2,063,327	-		Pf6N2E2_1749	0.58	-1.7
2,063,385	-		Pf6N2E2_1749	0.64	-0.7
2,063,385	-		Pf6N2E2_1749	0.64	+1.9
2,063,702	-				+0.9
2,063,702	-				+0.0
2,063,775	+				+0.9
2,063,776	-				+0.9
2,063,781	-				-0.1
2,063,811	+				-1.0
2,063,812	-				+0.9
2,063,852	-				-0.1
2,064,077	-		Pf6N2E2_1750	0.11	-0.5
2,064,077	-		Pf6N2E2_1750	0.11	+0.9
2,064,205	+		Pf6N2E2_1750	0.18	+0.9
2,064,205	+		Pf6N2E2_1750	0.18	+0.9
2,064,206	-		Pf6N2E2_1750	0.18	-0.2
2,064,206	-		Pf6N2E2_1750	0.18	+0.9
2,064,442	+		Pf6N2E2_1750	0.30	+0.9
2,064,443	-		Pf6N2E2_1750	0.30	-0.7
2,064,443	-		Pf6N2E2_1750	0.30	-1.2