Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1490

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,742,612	-				+0.8
1,742,804	-				-0.2
1,742,872	+				+0.8
1,742,875	+				-0.2
1,742,956	+				+0.8
1,743,080	-				+0.8
1,743,392	-				-0.2
1,743,405	+				+0.8
1,743,473	-		Pf6N2E2_1490	0.24	-1.0
1,743,554	+		Pf6N2E2_1490	0.73	-0.2
1,743,559	-		Pf6N2E2_1490	0.76	-0.8
1,743,620	+				+0.8
1,743,938	+				-0.4
1,743,958	+				+0.8
1,744,155	-		Pf6N2E2_1491	0.16	+0.8
1,744,271	+		Pf6N2E2_1491	0.20	-1.1
1,744,272	-		Pf6N2E2_1491	0.20	+0.8
1,744,344	+		Pf6N2E2_1491	0.23	+0.5
1,744,345	-		Pf6N2E2_1491	0.23	+0.8
1,744,345	-		Pf6N2E2_1491	0.23	-1.0
1,744,513	+		Pf6N2E2_1491	0.29	-0.4
1,744,563	-		Pf6N2E2_1491	0.31	-0.4
1,744,563	-		Pf6N2E2_1491	0.31	-1.8