Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5728

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
6,544,028	+				+0.9
6,544,028	+				-0.1
6,544,028	+				+0.9
6,544,028	+				+0.2
6,544,029	-				-0.8
6,544,029	-				-0.1
6,544,062	-				-0.1
6,544,080	-				-0.1
6,544,083	+				-1.1
6,544,084	-				+0.9
6,544,084	-				-0.2
6,544,084	-				+0.9
6,544,125	+				+0.9
6,544,208	+				+0.9
6,544,208	+				-1.4
6,544,208	+				-0.7
6,544,209	-				+0.9
6,544,209	-				-1.2
6,544,209	-				-1.1
6,544,209	-				-1.1
6,544,241	+				+0.9
6,544,241	+				-0.1
6,544,242	-				-0.1
6,544,242	-				+0.9
6,544,242	-				-0.7
6,544,242	-				+0.3
6,544,338	+				+0.9
6,544,338	+				+0.9
6,544,338	+				+0.9
6,544,338	+				-0.1
6,544,338	+				+0.9
6,544,339	-				+0.9
6,544,383	+		Pf6N2E2_5727	0.14	-0.5
6,544,384	-		Pf6N2E2_5727	0.14	+0.9
6,544,518	+		Pf6N2E2_5727	0.33	-0.6
6,544,518	+		Pf6N2E2_5727	0.33	+0.9
6,544,519	-		Pf6N2E2_5727	0.33	-0.1
6,544,519	-		Pf6N2E2_5727	0.33	+0.9
6,544,519	-		Pf6N2E2_5727	0.33	+0.9
6,544,523	-		Pf6N2E2_5727	0.34	+0.9
6,544,523	-		Pf6N2E2_5727	0.34	-2.0
6,544,523	-		Pf6N2E2_5727	0.34	+0.9
6,544,551	+		Pf6N2E2_5727	0.38	-0.5
6,544,552	-		Pf6N2E2_5727	0.38	-2.1
6,544,552	-		Pf6N2E2_5727	0.38	-1.5
6,544,552	-		Pf6N2E2_5727	0.38	-1.6
6,544,602	+		Pf6N2E2_5727	0.45	+0.9
6,544,602	+		Pf6N2E2_5727	0.45	-2.5
6,544,602	+		Pf6N2E2_5727	0.45	+0.9
6,544,603	-		Pf6N2E2_5727	0.45	+0.9
6,544,603	-		Pf6N2E2_5727	0.45	-0.6
6,544,743	+		Pf6N2E2_5727	0.64	+0.9
6,544,744	-		Pf6N2E2_5727	0.65	-0.1
6,544,840	+		Pf6N2E2_5727	0.78	+0.9
6,544,911	+		Pf6N2E2_5727	0.88	+0.9
6,544,912	-		Pf6N2E2_5727	0.88	-0.1
6,544,931	+				-1.1
6,544,932	-				+0.9
6,544,932	-				-2.2
6,544,932	-				+0.9
6,544,997	-				-1.1
6,545,006	+				+0.9
6,545,007	-				+0.9
6,545,007	-				+0.9
6,545,007	-				-0.1
6,545,007	-				-0.1
6,545,115	-		Pf6N2E2_5728	0.17	+0.9
6,545,182	+		Pf6N2E2_5728	0.27	-1.8
6,545,183	-		Pf6N2E2_5728	0.27	+0.9
6,545,185	+		Pf6N2E2_5728	0.28	-3.1
6,545,290	+		Pf6N2E2_5728	0.44	-1.1
6,545,291	-		Pf6N2E2_5728	0.44	-0.1
6,545,300	+		Pf6N2E2_5728	0.45	-0.1
6,545,301	-		Pf6N2E2_5728	0.45	+0.9
6,545,301	-		Pf6N2E2_5728	0.45	+0.9
6,545,301	-		Pf6N2E2_5728	0.45	+0.9
6,545,345	+		Pf6N2E2_5728	0.52	-1.5
6,545,608	-				+0.9