Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5282

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
6,072,533	+		Pf6N2E2_5281	0.27	+0.7
6,072,533	+		Pf6N2E2_5281	0.27	+1.0
6,072,534	-		Pf6N2E2_5281	0.27	-0.6
6,072,620	+		Pf6N2E2_5281	0.36	-0.0
6,072,620	+		Pf6N2E2_5281	0.36	-1.0
6,072,628	+		Pf6N2E2_5281	0.37	-2.6
6,072,660	-		Pf6N2E2_5281	0.41	+1.0
6,072,660	-		Pf6N2E2_5281	0.41	-0.6
6,072,845	-		Pf6N2E2_5281	0.61	-0.0
6,072,858	+		Pf6N2E2_5281	0.63	+1.0
6,072,858	+		Pf6N2E2_5281	0.63	-1.6
6,072,858	+		Pf6N2E2_5281	0.63	-0.6
6,072,858	+		Pf6N2E2_5281	0.63	+1.0
6,072,859	-		Pf6N2E2_5281	0.63	-0.0
6,072,859	-		Pf6N2E2_5281	0.63	-0.6
6,072,923	+		Pf6N2E2_5281	0.70	-2.3
6,072,923	+		Pf6N2E2_5281	0.70	-0.8
6,072,923	+		Pf6N2E2_5281	0.70	-0.6
6,072,923	+		Pf6N2E2_5281	0.70	-0.9
6,072,923	+		Pf6N2E2_5281	0.70	+1.0
6,072,923	+		Pf6N2E2_5281	0.70	-0.6
6,072,923	+		Pf6N2E2_5281	0.70	+1.0
6,072,923	+		Pf6N2E2_5281	0.70	-0.0
6,072,924	-		Pf6N2E2_5281	0.70	+1.0
6,072,924	-		Pf6N2E2_5281	0.70	-0.6
6,072,924	-		Pf6N2E2_5281	0.70	-0.6
6,072,924	-		Pf6N2E2_5281	0.70	-0.9
6,072,924	-		Pf6N2E2_5281	0.70	-0.3
6,072,924	-		Pf6N2E2_5281	0.70	+1.0
6,072,924	-		Pf6N2E2_5281	0.70	+1.0
6,072,924	-		Pf6N2E2_5281	0.70	-0.6
6,072,924	-		Pf6N2E2_5281	0.70	-0.7
6,072,924	-		Pf6N2E2_5281	0.70	+1.0
6,072,926	-		Pf6N2E2_5281	0.70	-1.0
6,073,139	+				+1.0
6,073,139	+				+1.0
6,073,140	-				-0.0
6,073,140	-				+1.0
6,073,140	-				+1.0
6,073,199	+				-1.5
6,073,200	-				+1.0
6,073,250	-				-0.0
6,073,250	-				+0.1
6,073,250	-				-0.3
6,073,250	-				+1.0
6,073,250	-				-1.6
6,073,250	-				-0.6
6,073,704	+		Pf6N2E2_5282	0.27	+1.0
6,073,705	-		Pf6N2E2_5282	0.27	-2.1
6,073,815	-		Pf6N2E2_5282	0.39	-0.0
6,073,839	-		Pf6N2E2_5282	0.42	-0.0
6,073,839	-		Pf6N2E2_5282	0.42	-0.0
6,073,839	-		Pf6N2E2_5282	0.42	-1.0
6,073,839	-		Pf6N2E2_5282	0.42	+1.0
6,073,839	-		Pf6N2E2_5282	0.42	-0.0
6,073,839	-		Pf6N2E2_5282	0.42	+1.0
6,073,839	-		Pf6N2E2_5282	0.42	-0.6
6,073,922	+		Pf6N2E2_5282	0.51	+1.0
6,073,923	-		Pf6N2E2_5282	0.51	-0.3
6,073,923	-		Pf6N2E2_5282	0.51	-0.0
6,073,923	-		Pf6N2E2_5282	0.51	-0.6
6,073,923	-		Pf6N2E2_5282	0.51	+0.3
6,073,947	-		Pf6N2E2_5282	0.54	+1.0
6,073,970	+		Pf6N2E2_5282	0.56	-1.0
6,073,971	-		Pf6N2E2_5282	0.56	-0.0
6,073,971	-		Pf6N2E2_5282	0.56	-0.6
6,074,014	+		Pf6N2E2_5282	0.61	-0.6
6,074,014	+		Pf6N2E2_5282	0.61	-2.0
6,074,015	-		Pf6N2E2_5282	0.61	-1.0
6,074,015	-		Pf6N2E2_5282	0.61	-0.0
6,074,082	+		Pf6N2E2_5282	0.69	-0.0
6,074,082	+		Pf6N2E2_5282	0.69	+1.0
6,074,083	-		Pf6N2E2_5282	0.69	-1.0
6,074,126	+		Pf6N2E2_5282	0.73	-0.5
6,074,126	+		Pf6N2E2_5282	0.73	-0.0
6,074,126	+		Pf6N2E2_5282	0.73	+1.0
6,074,126	+		Pf6N2E2_5282	0.73	+1.0
6,074,127	-		Pf6N2E2_5282	0.73	-0.6
6,074,358	-				-0.7
6,074,422	-				+1.0
6,074,513	+		Pf6N2E2_5283	0.35	-0.0
6,074,514	-		Pf6N2E2_5283	0.35	-0.6
6,074,559	+		Pf6N2E2_5283	0.50	+1.0
6,074,560	-		Pf6N2E2_5283	0.51	+1.0
6,074,560	-		Pf6N2E2_5283	0.51	-0.0
6,074,560	-		Pf6N2E2_5283	0.51	-0.6
6,074,565	+		Pf6N2E2_5283	0.52	-0.9
6,074,565	+		Pf6N2E2_5283	0.52	-0.0
6,074,565	+		Pf6N2E2_5283	0.52	+1.0
6,074,566	-		Pf6N2E2_5283	0.53	-0.5
6,074,566	-		Pf6N2E2_5283	0.53	-0.0
6,074,619	+		Pf6N2E2_5283	0.71	-1.6
6,074,619	+		Pf6N2E2_5283	0.71	+1.0
6,074,620	-		Pf6N2E2_5283	0.71	-0.0
6,074,620	-		Pf6N2E2_5283	0.71	+1.0
6,074,631	+		Pf6N2E2_5283	0.75	-1.0
6,074,631	+		Pf6N2E2_5283	0.75	+1.0
6,074,632	-		Pf6N2E2_5283	0.75	-0.6
6,074,632	-		Pf6N2E2_5283	0.75	+1.0
6,074,676	+				-1.0
6,074,687	+				-0.9
6,074,688	-				+1.0
6,074,688	-				-0.7
6,074,741	-				-0.6
6,074,741	-				-1.3
6,074,741	-				+1.0
6,074,741	-				+1.0
6,074,870	+				-0.1
6,074,870	+				+1.0
6,074,870	+				+1.0
6,074,871	-				+1.0
6,074,871	-				-1.9
6,074,871	-				+1.0
6,074,871	-				-0.2
6,074,871	-				-1.1
6,075,024	+				+1.0
6,075,024	+				-0.4
6,075,024	+				+1.0
6,075,034	+				-0.0
6,075,035	-				+1.0
6,075,035	-				-0.0
6,075,035	-				+1.0
6,075,038	+				-0.9
6,075,049	+				+1.0
6,075,050	-				-0.0
6,075,134	+				+1.0
6,075,134	+				+1.0
6,075,134	+				+1.0
6,075,135	-				-0.7
6,075,135	-				+1.0
6,075,135	-				-2.0
6,075,135	-				-0.0