Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4349

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
5,077,800	-				+0.1
5,077,800	-				-0.5
5,077,800	-				+0.1
5,077,905	+				+0.1
5,077,905	+				+0.1
5,077,905	+				-0.7
5,077,905	+				-0.9
5,077,905	+				+0.1
5,077,905	+				-0.8
5,077,905	+				-0.6
5,077,905	+				-0.6
5,077,905	+				-0.9
5,077,905	+				-0.3
5,077,906	-				+1.1
5,077,906	-				+1.1
5,077,906	-				+1.1
5,077,906	-				+1.1
5,077,906	-				+1.1
5,077,906	-				-0.6
5,077,906	-				+1.1
5,077,906	-				+1.1
5,077,906	-				-3.6
5,077,906	-				+1.1
5,077,911	+				-0.7
5,077,911	+				+0.1
5,077,912	-				+1.1
5,077,919	+				+1.1
5,077,919	+				+1.1
5,077,919	+				+1.1
5,077,919	+				-0.4
5,077,920	-				+1.1
5,077,920	-				-0.5
5,077,920	-				+1.1
5,077,920	-				+0.1
5,077,923	+				+1.1
5,077,923	+				-0.5
5,077,923	+				+0.1
5,077,923	+				+1.1
5,077,924	-				+0.1
5,077,924	-				-0.9
5,077,924	-				+0.1
5,077,924	-				-0.9
5,077,924	-				+0.1
5,077,924	-				-1.2
5,077,924	-				+1.1
5,077,924	-				+0.1
5,077,924	-				-1.2
5,077,924	-				+1.1
5,077,961	-				+1.1
5,077,961	-				+0.1
5,077,961	-				+1.1
5,077,961	-				-0.9
5,077,961	-				+1.1
5,077,978	+				-0.5
5,077,978	+				-0.9
5,077,978	+				+1.1
5,077,978	+				+0.5
5,077,978	+				+1.1
5,077,978	+				+0.1
5,077,978	+				+1.1
5,077,978	+				+1.1
5,077,979	-				+1.1
5,077,979	-				+0.1
5,077,979	-				-1.5
5,077,979	-				+1.1
5,077,979	-				-0.5
5,077,979	-				+0.1
5,077,979	-				+1.1
5,077,979	-				-0.9
5,078,043	+				+1.1
5,078,060	+				-0.5
5,078,060	+				-0.9
5,078,060	+				+0.1
5,078,065	-				-0.5
5,078,138	+				-0.5
5,078,138	+				-0.3
5,078,139	-				-0.9
5,078,139	-				+1.1
5,078,139	-				+0.1
5,078,139	-				-1.0
5,078,139	-				+0.1
5,078,139	-				-0.9
5,078,139	-				+1.1
5,078,139	-				-0.5
5,078,253	-				+0.1
5,078,529	+		Pf6N2E2_4349	0.47	+0.1
5,078,530	-		Pf6N2E2_4349	0.47	-0.5
5,078,694	+		Pf6N2E2_4349	0.89	+1.1
5,078,694	+		Pf6N2E2_4349	0.89	-0.5
5,078,694	+		Pf6N2E2_4349	0.89	+0.5
5,078,694	+		Pf6N2E2_4349	0.89	-2.0
5,078,694	+		Pf6N2E2_4349	0.89	-1.9
5,078,750	+				-1.2
5,078,750	+				+0.7
5,078,751	-				-0.5
5,078,766	+				-0.5
5,078,807	+				+1.1
5,078,807	+				+1.1
5,078,807	+				-0.9
5,078,807	+				-0.2
5,078,808	-				+1.1
5,078,808	-				+0.1
5,078,808	-				-0.3
5,078,808	-				+1.1
5,078,832	+				+0.1
5,078,833	-				+0.1
5,078,838	+				+0.1
5,078,838	+				-0.1
5,078,838	+				-0.5
5,078,838	+				-0.5
5,078,838	+				+0.1
5,078,839	-				-1.4
5,078,839	-				+1.1
5,078,839	-				-0.5
5,078,839	-				+0.3
5,078,839	-				+1.1
5,078,839	-				+0.1
5,078,839	-				+0.1
5,078,842	+				+1.1
5,078,842	+				-2.1
5,078,842	+				+1.1
5,078,842	+				-0.9
5,078,842	+				+1.1
5,078,842	+				-0.5
5,078,843	-				-2.8
5,078,843	-				-0.5
5,078,843	-				+0.1
5,078,846	+				-0.5
5,078,847	-				-1.2
5,078,907	+				+0.1
5,078,949	+				+1.1
5,078,949	+				+0.1
5,078,949	+				-0.7
5,078,950	-				-0.4
5,078,950	-				+0.6
5,078,950	-				-0.6
5,078,950	-				+1.1
5,078,950	-				+0.1
5,079,016	+				-0.3
5,079,016	+				+0.1
5,079,016	+				-1.4
5,079,016	+				+0.1
5,079,017	-				+1.1
5,079,017	-				-0.9
5,079,017	-				+1.1
5,079,017	-				+0.5
5,079,017	-				-0.4
5,079,021	+		Pf6N2E2_4350	0.10	-0.2
5,079,028	-		Pf6N2E2_4350	0.11	+0.1
5,079,040	-		Pf6N2E2_4350	0.12	-0.4
5,079,040	-		Pf6N2E2_4350	0.12	-0.4
5,079,040	-		Pf6N2E2_4350	0.12	+0.1
5,079,152	+		Pf6N2E2_4350	0.20	-0.4
5,079,153	-		Pf6N2E2_4350	0.20	+1.1
5,079,220	+		Pf6N2E2_4350	0.25	+0.5
5,079,242	+		Pf6N2E2_4350	0.27	+1.1
5,079,242	+		Pf6N2E2_4350	0.27	-0.9
5,079,243	-		Pf6N2E2_4350	0.27	+1.1
5,079,243	-		Pf6N2E2_4350	0.27	+1.1
5,079,243	-		Pf6N2E2_4350	0.27	-0.5
5,079,243	-		Pf6N2E2_4350	0.27	-0.3
5,079,257	-		Pf6N2E2_4350	0.28	-0.5
5,079,277	+		Pf6N2E2_4350	0.29	+1.1
5,079,372	+		Pf6N2E2_4350	0.36	+0.4
5,079,372	+		Pf6N2E2_4350	0.36	-0.5
5,079,372	+		Pf6N2E2_4350	0.36	-0.5
5,079,372	+		Pf6N2E2_4350	0.36	+1.1
5,079,372	+		Pf6N2E2_4350	0.36	-0.5
5,079,373	-		Pf6N2E2_4350	0.36	+1.1
5,079,455	+		Pf6N2E2_4350	0.42	+1.1
5,079,455	+		Pf6N2E2_4350	0.42	-0.5
5,079,455	+		Pf6N2E2_4350	0.42	+1.1
5,079,455	+		Pf6N2E2_4350	0.42	-0.6
5,079,455	+		Pf6N2E2_4350	0.42	+0.5
5,079,455	+		Pf6N2E2_4350	0.42	-0.8
5,079,455	+		Pf6N2E2_4350	0.42	-0.5
5,079,455	+		Pf6N2E2_4350	0.42	+1.1
5,079,455	+		Pf6N2E2_4350	0.42	+0.1
5,079,455	+		Pf6N2E2_4350	0.42	-0.9
5,079,456	-		Pf6N2E2_4350	0.42	+1.1
5,079,456	-		Pf6N2E2_4350	0.42	-0.5
5,079,456	-		Pf6N2E2_4350	0.42	-0.5
5,079,456	-		Pf6N2E2_4350	0.42	+1.1
5,079,456	-		Pf6N2E2_4350	0.42	-0.5
5,079,456	-		Pf6N2E2_4350	0.42	+0.1
5,079,456	-		Pf6N2E2_4350	0.42	+0.1
5,079,456	-		Pf6N2E2_4350	0.42	+1.1
5,079,456	-		Pf6N2E2_4350	0.42	+1.1
5,079,456	-		Pf6N2E2_4350	0.42	-0.6
5,079,489	+		Pf6N2E2_4350	0.45	+0.2
5,079,489	+		Pf6N2E2_4350	0.45	-0.9
5,079,489	+		Pf6N2E2_4350	0.45	-0.1
5,079,490	-		Pf6N2E2_4350	0.45	+0.1
5,079,490	-		Pf6N2E2_4350	0.45	-0.5
5,079,490	-		Pf6N2E2_4350	0.45	+1.1
5,079,490	-		Pf6N2E2_4350	0.45	+0.1
5,079,523	+		Pf6N2E2_4350	0.47	+1.1
5,079,523	+		Pf6N2E2_4350	0.47	+1.1
5,079,523	+		Pf6N2E2_4350	0.47	-0.1
5,079,523	+		Pf6N2E2_4350	0.47	-0.5
5,079,524	-		Pf6N2E2_4350	0.48	+1.1
5,079,524	-		Pf6N2E2_4350	0.48	+1.1
5,079,524	-		Pf6N2E2_4350	0.48	+1.7
5,079,524	-		Pf6N2E2_4350	0.48	-0.5
5,079,524	-		Pf6N2E2_4350	0.48	+1.1
5,079,550	+		Pf6N2E2_4350	0.49	+1.1
5,079,550	+		Pf6N2E2_4350	0.49	+1.1
5,079,551	-		Pf6N2E2_4350	0.50	-0.5
5,079,551	-		Pf6N2E2_4350	0.50	+1.1
5,079,671	+		Pf6N2E2_4350	0.58	-0.2
5,079,671	+		Pf6N2E2_4350	0.58	-0.5
5,079,671	+		Pf6N2E2_4350	0.58	-0.5
5,079,671	+		Pf6N2E2_4350	0.58	-0.9
5,079,671	+		Pf6N2E2_4350	0.58	+0.1
5,079,672	-		Pf6N2E2_4350	0.59	+1.1
5,079,672	-		Pf6N2E2_4350	0.59	+1.1
5,079,672	-		Pf6N2E2_4350	0.59	+1.1