Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1355

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,587,951	+		Pf6N2E2_1353	0.56	+0.8
1,587,952	-		Pf6N2E2_1353	0.56	-0.2
1,588,047	+		Pf6N2E2_1353	0.74	-0.8
1,588,048	-		Pf6N2E2_1353	0.74	+0.8
1,588,048	-		Pf6N2E2_1353	0.74	+0.8
1,588,048	-		Pf6N2E2_1353	0.74	-0.4
1,588,115	-		Pf6N2E2_1353	0.86	+2.4
1,588,115	-		Pf6N2E2_1353	0.86	-0.8
1,588,338	-		Pf6N2E2_1354	0.29	+0.8
1,588,364	+		Pf6N2E2_1354	0.34	+0.8
1,588,364	+		Pf6N2E2_1354	0.34	+0.8
1,588,364	+		Pf6N2E2_1354	0.34	-0.2
1,588,365	-		Pf6N2E2_1354	0.35	-1.1
1,588,365	-		Pf6N2E2_1354	0.35	-0.5
1,588,402	-		Pf6N2E2_1354	0.42	+0.8
1,588,527	-		Pf6N2E2_1354	0.66	+0.8
1,588,610	+		Pf6N2E2_1354	0.82	+0.8
1,588,611	-		Pf6N2E2_1354	0.82	-0.2
1,588,689	-				+0.8
1,588,695	+				-0.2
1,588,696	-				+0.8
1,588,827	+				+0.8
1,588,827	+				+0.8
1,588,827	+				-0.1
1,588,828	-				+0.8
1,588,828	-				-0.7
1,588,829	+				+0.8
1,588,829	+				+0.8
1,588,841	+				-0.8
1,588,894	+		Pf6N2E2_1355	0.17	+0.8
1,588,895	-		Pf6N2E2_1355	0.18	+0.8
1,588,895	-		Pf6N2E2_1355	0.18	-0.8
1,588,901	+		Pf6N2E2_1355	0.19	+0.8
1,589,057	-		Pf6N2E2_1355	0.59	-1.3
1,589,072	+		Pf6N2E2_1355	0.63	+0.8
1,589,100	+		Pf6N2E2_1355	0.70	-1.5
1,589,100	+		Pf6N2E2_1355	0.70	-0.2
1,589,100	+		Pf6N2E2_1355	0.70	-1.6
1,589,100	+		Pf6N2E2_1355	0.70	+0.8
1,589,100	+		Pf6N2E2_1355	0.70	-0.8
1,589,101	-		Pf6N2E2_1355	0.71	+0.8
1,589,101	-		Pf6N2E2_1355	0.71	+0.8
1,589,101	-		Pf6N2E2_1355	0.71	+0.8
1,589,101	-		Pf6N2E2_1355	0.71	+0.8
1,589,223	+				+0.8
1,589,276	-				+0.8
1,589,276	-				+0.8
1,589,276	-				-0.2
1,589,276	-				-0.2
1,589,287	+				-0.2
1,589,288	-				-0.4
1,589,288	-				+0.8
1,589,288	-				-1.2
1,589,296	+				+0.8
1,589,296	+				+0.8
1,589,296	+				-0.8
1,589,296	+				+0.8
1,589,297	-				-0.5
1,589,297	-				-0.6
1,589,297	-				+0.8
1,589,417	-		Pf6N2E2_1356	0.24	+0.8
1,589,420	+		Pf6N2E2_1356	0.24	+0.8
1,589,421	-		Pf6N2E2_1356	0.25	+0.8
1,589,421	-		Pf6N2E2_1356	0.25	+0.8
1,589,421	-		Pf6N2E2_1356	0.25	-0.5
1,589,506	+		Pf6N2E2_1356	0.43	+0.8
1,589,507	-		Pf6N2E2_1356	0.43	+0.8
1,589,507	-		Pf6N2E2_1356	0.43	-0.2
1,589,689	-		Pf6N2E2_1356	0.83	+0.1
1,589,689	-		Pf6N2E2_1356	0.83	-0.2
1,589,689	-		Pf6N2E2_1356	0.83	+0.8
1,589,801	+				+0.8
1,589,802	-				-0.2
1,589,802	-				+0.8
1,589,802	-				-0.4
1,589,824	-				+0.8
1,589,846	+				+0.2
1,589,847	-				-0.2
1,589,861	+				+0.8
1,589,861	+				+0.8
1,589,862	-				+0.8
1,589,862	-				+0.8
1,589,862	-				+0.8
1,589,862	-				-0.5