Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6157

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
6,360,362	+		Pf6N2E2_5545	0.75	+0.5
6,360,487	+				+0.4
6,360,487	+				-0.0
6,360,487	+				+1.0
6,360,488	-				+1.0
6,360,488	-				+1.0
6,360,491	+				-0.0
6,360,491	+				+0.4
6,360,491	+				+1.0
6,360,492	-				+1.0
6,360,521	+				-0.0
6,360,521	+				-0.0
6,360,522	-				-0.0
6,360,522	-				+0.6
6,360,631	-		Pf6N2E2_5546	0.16	+1.0
6,360,631	-		Pf6N2E2_5546	0.16	+1.0
6,360,631	-		Pf6N2E2_5546	0.16	+1.0
6,360,649	-		Pf6N2E2_5546	0.18	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,819	+		Pf6N2E2_5546	0.43	+1.0
6,360,820	-		Pf6N2E2_5546	0.43	-0.0
6,360,820	-		Pf6N2E2_5546	0.43	-0.6
6,360,820	-		Pf6N2E2_5546	0.43	+1.0
6,360,820	-		Pf6N2E2_5546	0.43	-0.0
6,360,820	-		Pf6N2E2_5546	0.43	+1.0
6,360,820	-		Pf6N2E2_5546	0.43	-0.0
6,360,833	+		Pf6N2E2_5546	0.45	-0.6
6,360,833	+		Pf6N2E2_5546	0.45	-0.6
6,360,841	+		Pf6N2E2_5546	0.46	-1.6
6,360,842	-		Pf6N2E2_5546	0.46	-0.0
6,361,424	+				-0.0
6,361,424	+				-0.6
6,361,424	+				-0.6
6,361,425	-				-0.0
6,361,668	-		Pf6N2E2_5547	0.12	+0.4
6,361,746	+		Pf6N2E2_5547	0.17	+1.0
6,361,746	+		Pf6N2E2_5547	0.17	+1.0
6,361,752	+		Pf6N2E2_5547	0.17	-2.6
6,361,752	+		Pf6N2E2_5547	0.17	-0.8
6,361,752	+		Pf6N2E2_5547	0.17	+1.0
6,361,752	+		Pf6N2E2_5547	0.17	-0.0
6,361,752	+		Pf6N2E2_5547	0.17	-0.7
6,361,753	-		Pf6N2E2_5547	0.17	+0.1
6,361,753	-		Pf6N2E2_5547	0.17	-2.5
6,361,753	-		Pf6N2E2_5547	0.17	-0.0
6,361,753	-		Pf6N2E2_5547	0.17	-0.6
6,361,753	-		Pf6N2E2_5547	0.17	-0.8
6,361,753	-		Pf6N2E2_5547	0.17	+1.0
6,361,769	-		Pf6N2E2_5547	0.19	+1.0
6,361,769	-		Pf6N2E2_5547	0.19	-1.0
6,361,851	+		Pf6N2E2_5547	0.24	+1.0
6,361,851	+		Pf6N2E2_5547	0.24	-1.1
6,361,851	+		Pf6N2E2_5547	0.24	-0.0
6,361,851	+		Pf6N2E2_5547	0.24	-2.2
6,361,852	-		Pf6N2E2_5547	0.24	+1.0
6,361,852	-		Pf6N2E2_5547	0.24	+1.0
6,361,918	+		Pf6N2E2_5547	0.29	+1.0
6,361,919	-		Pf6N2E2_5547	0.29	-1.2
6,361,950	+		Pf6N2E2_5547	0.31	-0.6
6,361,951	-		Pf6N2E2_5547	0.31	-0.0
6,361,951	-		Pf6N2E2_5547	0.31	+1.0
6,361,951	-		Pf6N2E2_5547	0.31	-0.0
6,362,008	+		Pf6N2E2_5547	0.35	+1.0
6,362,008	+		Pf6N2E2_5547	0.35	+1.0
6,362,009	-		Pf6N2E2_5547	0.35	+1.0
6,362,009	-		Pf6N2E2_5547	0.35	-0.2
6,362,009	-		Pf6N2E2_5547	0.35	+1.0
6,362,009	-		Pf6N2E2_5547	0.35	-0.0
6,362,009	-		Pf6N2E2_5547	0.35	-0.0
6,362,034	+		Pf6N2E2_5547	0.37	-1.3
6,362,034	+		Pf6N2E2_5547	0.37	-0.0
6,362,035	-		Pf6N2E2_5547	0.37	+1.0
6,362,035	-		Pf6N2E2_5547	0.37	+1.0
6,362,035	-		Pf6N2E2_5547	0.37	+1.0
6,362,089	+		Pf6N2E2_5547	0.41	+1.0
6,362,089	+		Pf6N2E2_5547	0.41	-0.0
6,362,090	-		Pf6N2E2_5547	0.41	-0.0
6,362,090	-		Pf6N2E2_5547	0.41	-0.0
6,362,122	+		Pf6N2E2_5547	0.43	-0.5
6,362,122	+		Pf6N2E2_5547	0.43	+1.0
6,362,122	+		Pf6N2E2_5547	0.43	+1.0
6,362,122	+		Pf6N2E2_5547	0.43	-0.0
6,362,122	+		Pf6N2E2_5547	0.43	+1.0
6,362,122	+		Pf6N2E2_5547	0.43	+1.0
6,362,123	-		Pf6N2E2_5547	0.43	-1.0
6,362,123	-		Pf6N2E2_5547	0.43	-0.0
6,362,123	-		Pf6N2E2_5547	0.43	-0.0
6,362,123	-		Pf6N2E2_5547	0.43	+2.3
6,362,123	-		Pf6N2E2_5547	0.43	-0.0
6,362,123	-		Pf6N2E2_5547	0.43	+1.0
6,362,123	-		Pf6N2E2_5547	0.43	-0.9
6,362,123	-		Pf6N2E2_5547	0.43	-0.0
6,362,130	+		Pf6N2E2_5547	0.44	-0.6
6,362,130	+		Pf6N2E2_5547	0.44	-1.0
6,362,130	+		Pf6N2E2_5547	0.44	+1.0
6,362,130	+		Pf6N2E2_5547	0.44	+1.0
6,362,131	-		Pf6N2E2_5547	0.44	-1.1
6,362,131	-		Pf6N2E2_5547	0.44	+1.0
6,362,131	-		Pf6N2E2_5547	0.44	-1.0
6,362,175	+		Pf6N2E2_5547	0.47	+2.0
6,362,257	-		Pf6N2E2_5547	0.53	+1.0
6,362,348	+		Pf6N2E2_5547	0.59	-1.3
6,362,349	-		Pf6N2E2_5547	0.59	+0.4