Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3928

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
4,564,473	+		Pf6N2E2_3927	0.11	+0.1
4,564,473	+		Pf6N2E2_3927	0.11	-0.3
4,564,473	+		Pf6N2E2_3927	0.11	+1.1
4,564,473	+		Pf6N2E2_3927	0.11	-0.4
4,564,473	+		Pf6N2E2_3927	0.11	-1.5
4,564,474	-		Pf6N2E2_3927	0.11	-0.5
4,564,474	-		Pf6N2E2_3927	0.11	-0.7
4,564,474	-		Pf6N2E2_3927	0.11	+0.1
4,564,642	+		Pf6N2E2_3927	0.26	+0.2
4,564,642	+		Pf6N2E2_3927	0.26	-0.5
4,564,643	-		Pf6N2E2_3927	0.26	+1.1
4,565,186	-		Pf6N2E2_3927	0.74	-0.5
4,565,330	-		Pf6N2E2_3927	0.87	-0.7
4,565,377	+				-1.2
4,565,377	+				-0.6
4,565,377	+				+1.1
4,565,377	+				-0.5
4,565,377	+				+1.1
4,565,377	+				-0.5
4,565,378	-				-0.5
4,565,378	-				+0.5
4,565,466	+				+0.1
4,565,467	-				+0.1
4,565,467	-				-0.8
4,565,467	-				+0.1
4,565,483	+				+1.1
4,565,596	+		Pf6N2E2_3928	0.20	+1.1
4,565,596	+		Pf6N2E2_3928	0.20	+1.1
4,565,596	+		Pf6N2E2_3928	0.20	-0.9
4,565,596	+		Pf6N2E2_3928	0.20	-0.8
4,565,596	+		Pf6N2E2_3928	0.20	+0.1
4,565,596	+		Pf6N2E2_3928	0.20	+1.1
4,565,596	+		Pf6N2E2_3928	0.20	-0.7
4,565,597	-		Pf6N2E2_3928	0.20	+0.1
4,565,597	-		Pf6N2E2_3928	0.20	+1.1
4,565,597	-		Pf6N2E2_3928	0.20	+0.1
4,565,597	-		Pf6N2E2_3928	0.20	-0.7
4,565,597	-		Pf6N2E2_3928	0.20	+0.3
4,565,597	-		Pf6N2E2_3928	0.20	+0.1
4,565,597	-		Pf6N2E2_3928	0.20	+1.1
4,565,716	+		Pf6N2E2_3928	0.39	+0.1
4,565,716	+		Pf6N2E2_3928	0.39	+1.1
4,565,716	+		Pf6N2E2_3928	0.39	+1.1
4,565,716	+		Pf6N2E2_3928	0.39	+0.1
4,565,716	+		Pf6N2E2_3928	0.39	+1.1
4,565,716	+		Pf6N2E2_3928	0.39	+1.1
4,565,716	+		Pf6N2E2_3928	0.39	-0.9
4,565,716	+		Pf6N2E2_3928	0.39	+0.3
4,565,716	+		Pf6N2E2_3928	0.39	-0.3
4,565,716	+		Pf6N2E2_3928	0.39	-0.5
4,565,717	-		Pf6N2E2_3928	0.39	-0.3
4,565,717	-		Pf6N2E2_3928	0.39	+0.5
4,565,717	-		Pf6N2E2_3928	0.39	+1.1
4,565,717	-		Pf6N2E2_3928	0.39	-0.5
4,565,907	+		Pf6N2E2_3928	0.68	-0.5
4,565,907	+		Pf6N2E2_3928	0.68	-0.5
4,565,907	+		Pf6N2E2_3928	0.68	-0.5
4,565,908	-		Pf6N2E2_3928	0.68	-1.3
4,566,136	+				-0.9
4,566,136	+				+0.1
4,566,138	+				+0.1
4,566,138	+				+1.1
4,566,139	-				+1.0
4,566,230	-				-0.7
4,566,230	-				+0.0
4,566,288	+		Pf6N2E2_3929	0.18	-1.1
4,566,309	+		Pf6N2E2_3929	0.21	+1.0
4,566,309	+		Pf6N2E2_3929	0.21	+0.0
4,566,310	-		Pf6N2E2_3929	0.22	+1.0
4,566,310	-		Pf6N2E2_3929	0.22	-1.3
4,566,310	-		Pf6N2E2_3929	0.22	-0.5
4,566,310	-		Pf6N2E2_3929	0.22	-0.7
4,566,671	-		Pf6N2E2_3929	0.79	-2.3
4,566,733	+		Pf6N2E2_3929	0.89	-1.7
4,566,733	+		Pf6N2E2_3929	0.89	+0.0
4,566,734	-		Pf6N2E2_3929	0.89	-0.5
4,566,734	-		Pf6N2E2_3929	0.89	+1.0
4,566,736	+		Pf6N2E2_3929	0.89	-0.5
4,566,904	+				-1.5
4,566,905	-				+0.1
4,566,905	-				-0.9
4,567,088	+		Pf6N2E2_3930	0.12	+1.1
4,567,088	+		Pf6N2E2_3930	0.12	-0.7
4,567,088	+		Pf6N2E2_3930	0.12	+0.1
4,567,088	+		Pf6N2E2_3930	0.12	+1.1
4,567,089	-		Pf6N2E2_3930	0.12	-0.5
4,567,089	-		Pf6N2E2_3930	0.12	+1.1
4,567,089	-		Pf6N2E2_3930	0.12	+1.1
4,567,089	-		Pf6N2E2_3930	0.12	-0.5
4,567,089	-		Pf6N2E2_3930	0.12	-0.6
4,567,089	-		Pf6N2E2_3930	0.12	+1.1