Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3916

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
4,550,428	+		Pf6N2E2_3915	0.24	+1.1
4,550,469	+		Pf6N2E2_3915	0.29	+1.1
4,550,510	-		Pf6N2E2_3915	0.33	+0.1
4,550,536	+		Pf6N2E2_3915	0.36	-0.7
4,550,536	+		Pf6N2E2_3915	0.36	-0.5
4,550,536	+		Pf6N2E2_3915	0.36	+1.1
4,550,536	+		Pf6N2E2_3915	0.36	+1.1
4,550,536	+		Pf6N2E2_3915	0.36	+0.1
4,550,537	-		Pf6N2E2_3915	0.36	-0.7
4,550,537	-		Pf6N2E2_3915	0.36	-0.1
4,550,537	-		Pf6N2E2_3915	0.36	-0.5
4,550,537	-		Pf6N2E2_3915	0.36	+0.2
4,550,537	-		Pf6N2E2_3915	0.36	+2.1
4,550,537	-		Pf6N2E2_3915	0.36	+0.1
4,550,587	+		Pf6N2E2_3915	0.42	+1.1
4,550,672	+		Pf6N2E2_3915	0.51	-0.9
4,550,748	+		Pf6N2E2_3915	0.60	+1.1
4,550,748	+		Pf6N2E2_3915	0.60	-0.5
4,550,748	+		Pf6N2E2_3915	0.60	+1.1
4,550,748	+		Pf6N2E2_3915	0.60	+1.1
4,550,748	+		Pf6N2E2_3915	0.60	+0.1
4,550,749	-		Pf6N2E2_3915	0.60	-0.5
4,550,749	-		Pf6N2E2_3915	0.60	+0.1
4,550,749	-		Pf6N2E2_3915	0.60	-1.3
4,550,749	-		Pf6N2E2_3915	0.60	+0.8
4,550,749	-		Pf6N2E2_3915	0.60	+1.1
4,550,749	-		Pf6N2E2_3915	0.60	-0.9
4,550,798	-		Pf6N2E2_3915	0.66	+1.1
4,550,911	+		Pf6N2E2_3915	0.78	+0.1
4,550,911	+		Pf6N2E2_3915	0.78	-0.3
4,550,911	+		Pf6N2E2_3915	0.78	+1.1
4,550,911	+		Pf6N2E2_3915	0.78	+1.1
4,550,912	-		Pf6N2E2_3915	0.78	+1.1
4,551,023	+				+0.6
4,551,023	+				+1.1
4,551,023	+				+1.1
4,551,023	+				-0.7
4,551,024	-				+0.1
4,551,024	-				+1.1
4,551,024	-				+0.1
4,551,024	-				-0.9
4,551,064	+				+0.2
4,551,064	+				-0.5
4,551,064	+				-0.9
4,551,064	+				+1.1
4,551,064	+				-0.2
4,551,064	+				-0.5
4,551,065	-				+1.1
4,551,065	-				-1.7
4,551,065	-				+0.1
4,551,065	-				+1.1
4,551,065	-				-0.5
4,551,065	-				-0.6
4,551,065	-				-0.9
4,551,065	-				+0.1
4,551,067	-				+1.1
4,551,161	+				-1.4
4,551,165	+				-0.9
4,551,165	+				+1.1
4,551,177	+				-0.5
4,551,178	-				+1.1
4,551,345	+		Pf6N2E2_3916	0.15	-1.6
4,551,345	+		Pf6N2E2_3916	0.15	-0.5
4,551,345	+		Pf6N2E2_3916	0.15	-1.3
4,551,345	+		Pf6N2E2_3916	0.15	+1.1
4,551,696	+		Pf6N2E2_3916	0.62	+1.1
4,551,696	+		Pf6N2E2_3916	0.62	-0.9
4,551,696	+		Pf6N2E2_3916	0.62	+0.1
4,551,696	+		Pf6N2E2_3916	0.62	-1.8
4,551,697	-		Pf6N2E2_3916	0.62	-0.9
4,551,846	+		Pf6N2E2_3916	0.82	+1.1
4,551,847	-		Pf6N2E2_3916	0.82	+0.1
4,552,027	+				+0.3
4,552,027	+				+0.1
4,552,066	+				-1.0
4,552,066	+				+1.1
4,552,067	-				-0.5
4,552,081	+				-0.9
4,552,081	+				+1.1
4,552,120	+				-0.7
4,552,121	-				-1.1
4,552,124	-				-0.5
4,552,124	-				-0.5
4,552,124	-				+1.1
4,552,183	+				+1.1
4,552,204	+		Pf6N2E2_3917	0.11	+0.4
4,552,204	+		Pf6N2E2_3917	0.11	+1.1
4,552,205	-		Pf6N2E2_3917	0.11	-0.3
4,552,483	+		Pf6N2E2_3917	0.25	+0.1
4,552,483	+		Pf6N2E2_3917	0.25	-1.3
4,552,484	-		Pf6N2E2_3917	0.25	-0.5
4,552,484	-		Pf6N2E2_3917	0.25	+0.1
4,552,484	-		Pf6N2E2_3917	0.25	+1.1
4,552,778	-		Pf6N2E2_3917	0.39	-1.3
4,552,795	+		Pf6N2E2_3917	0.40	+1.1
4,552,795	+		Pf6N2E2_3917	0.40	+1.1
4,552,796	-		Pf6N2E2_3917	0.40	+0.1
4,552,796	-		Pf6N2E2_3917	0.40	+1.1