Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3680

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
4,287,635	+				-0.5
4,287,635	+				+1.1
4,287,641	+				+0.1
4,287,641	+				+1.1
4,287,641	+				+0.1
4,287,642	-				+1.1
4,287,642	-				+0.1
4,287,923	-		Pf6N2E2_3679	0.26	-0.9
4,288,256	-		Pf6N2E2_3679	0.66	+0.1
4,288,258	+		Pf6N2E2_3679	0.66	+1.1
4,288,258	+		Pf6N2E2_3679	0.66	+0.1
4,288,303	+		Pf6N2E2_3679	0.72	-0.7
4,288,303	+		Pf6N2E2_3679	0.72	-1.0
4,288,304	-		Pf6N2E2_3679	0.72	+0.1
4,288,304	-		Pf6N2E2_3679	0.72	-1.2
4,288,304	-		Pf6N2E2_3679	0.72	-0.5
4,288,364	-		Pf6N2E2_3679	0.79	+1.1
4,288,402	+		Pf6N2E2_3679	0.83	+1.1
4,288,403	-		Pf6N2E2_3679	0.83	-1.7
4,288,498	-				+2.1
4,288,570	-				-0.6
4,288,645	+				+0.1
4,288,646	-				+1.1
4,288,646	-				+0.1
4,289,028	+		Pf6N2E2_3680	0.59	+0.1
4,289,028	+		Pf6N2E2_3680	0.59	+1.1
4,289,028	+		Pf6N2E2_3680	0.59	-1.7
4,289,029	-		Pf6N2E2_3680	0.59	+0.1
4,289,029	-		Pf6N2E2_3680	0.59	+1.1
4,289,160	+		Pf6N2E2_3680	0.78	+0.1
4,289,160	+		Pf6N2E2_3680	0.78	+1.1
4,289,160	+		Pf6N2E2_3680	0.78	+1.1
4,289,161	-		Pf6N2E2_3680	0.78	-1.5
4,289,161	-		Pf6N2E2_3680	0.78	-0.5
4,289,161	-		Pf6N2E2_3680	0.78	-1.5
4,289,161	-		Pf6N2E2_3680	0.78	-0.9
4,289,161	-		Pf6N2E2_3680	0.78	+0.1
4,289,161	-		Pf6N2E2_3680	0.78	+1.1
4,289,164	+		Pf6N2E2_3680	0.79	+0.1
4,289,164	+		Pf6N2E2_3680	0.79	+0.1
4,289,165	-		Pf6N2E2_3680	0.79	+1.1
4,289,165	-		Pf6N2E2_3680	0.79	+0.1
4,289,165	-		Pf6N2E2_3680	0.79	+0.1
4,289,289	+				-0.5
4,289,290	-				-0.4
4,289,290	-				-2.4
4,289,290	-				+0.1
4,289,580	-		Pf6N2E2_3681	0.11	-1.2
4,289,664	-		Pf6N2E2_3681	0.15	-0.1
4,289,664	-		Pf6N2E2_3681	0.15	-1.5
4,289,664	-		Pf6N2E2_3681	0.15	+0.1
4,289,728	+		Pf6N2E2_3681	0.18	-0.0
4,289,728	+		Pf6N2E2_3681	0.18	-0.8
4,289,922	+		Pf6N2E2_3681	0.28	+0.1
4,289,922	+		Pf6N2E2_3681	0.28	+1.1
4,289,922	+		Pf6N2E2_3681	0.28	-0.5
4,289,922	+		Pf6N2E2_3681	0.28	-0.9
4,289,922	+		Pf6N2E2_3681	0.28	+1.1
4,289,922	+		Pf6N2E2_3681	0.28	-1.2
4,289,922	+		Pf6N2E2_3681	0.28	+1.1
4,289,922	+		Pf6N2E2_3681	0.28	-0.1
4,289,923	-		Pf6N2E2_3681	0.28	-1.4
4,289,923	-		Pf6N2E2_3681	0.28	-0.7
4,289,968	-		Pf6N2E2_3681	0.30	+1.1
4,289,968	-		Pf6N2E2_3681	0.30	+0.1