Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3241

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
3,744,473	+		Pf6N2E2_3239	0.88	+1.1
3,744,474	-		Pf6N2E2_3239	0.88	-0.5
3,744,629	+				+1.1
3,744,629	+				-0.9
3,744,630	-				-0.7
3,744,630	-				+1.1
3,744,717	+				+0.1
3,744,717	+				+0.1
3,744,717	+				-0.5
3,744,717	+				+0.1
3,744,718	-				+0.1
3,744,718	-				+1.1
3,745,089	+		Pf6N2E2_3240	0.64	-1.9
3,745,257	+				+0.1
3,745,365	-				-0.5
3,745,435	-				+0.3
3,745,435	-				+1.1
3,745,516	+				+0.1
3,745,517	-				-1.1
3,745,708	+		Pf6N2E2_3241	0.10	+0.1
3,745,709	-		Pf6N2E2_3241	0.10	+0.1
3,746,058	+		Pf6N2E2_3241	0.24	+0.1
3,746,058	+		Pf6N2E2_3241	0.24	+1.1
3,746,059	-		Pf6N2E2_3241	0.24	-2.9
3,746,059	-		Pf6N2E2_3241	0.24	-0.5
3,746,059	-		Pf6N2E2_3241	0.24	+0.1
3,746,059	-		Pf6N2E2_3241	0.24	+0.1
3,746,154	+		Pf6N2E2_3241	0.27	+1.1
3,746,154	+		Pf6N2E2_3241	0.27	+0.1
3,746,154	+		Pf6N2E2_3241	0.27	+1.1
3,746,155	-		Pf6N2E2_3241	0.28	+0.1
3,746,155	-		Pf6N2E2_3241	0.28	+1.1
3,746,158	-		Pf6N2E2_3241	0.28	+1.1
3,746,158	-		Pf6N2E2_3241	0.28	-0.5
3,746,158	-		Pf6N2E2_3241	0.28	-0.5
3,746,239	-		Pf6N2E2_3241	0.31	+0.1
3,746,239	-		Pf6N2E2_3241	0.31	-1.3
3,746,376	+		Pf6N2E2_3241	0.36	+1.1
3,746,376	+		Pf6N2E2_3241	0.36	+0.1
3,746,376	+		Pf6N2E2_3241	0.36	-1.9
3,746,377	-		Pf6N2E2_3241	0.36	-0.9
3,746,377	-		Pf6N2E2_3241	0.36	+1.1
3,746,377	-		Pf6N2E2_3241	0.36	-1.0
3,746,377	-		Pf6N2E2_3241	0.36	+1.1
3,746,404	-		Pf6N2E2_3241	0.37	+0.6
3,746,692	-		Pf6N2E2_3241	0.48	+1.1
3,746,869	-		Pf6N2E2_3241	0.55	+0.1
3,746,869	-		Pf6N2E2_3241	0.55	-0.9
3,746,869	-		Pf6N2E2_3241	0.55	-0.9
3,747,163	-		Pf6N2E2_3241	0.66	-0.9
3,747,354	+		Pf6N2E2_3241	0.74	+1.1
3,747,443	+		Pf6N2E2_3241	0.77	+1.1
3,747,718	-		Pf6N2E2_3241	0.88	+1.1
3,747,755	+		Pf6N2E2_3241	0.89	-0.5
3,747,755	+		Pf6N2E2_3241	0.89	-0.9
3,747,756	-		Pf6N2E2_3241	0.89	+1.1
3,747,756	-		Pf6N2E2_3241	0.89	-1.7
3,748,081	+				-1.3
3,748,081	+				-0.5
3,748,082	-				-0.5
3,748,128	-				+1.1
3,748,190	+				-0.5
3,748,191	-				-1.0
3,748,234	+				+0.1
3,748,246	+				-0.7
3,748,246	+				-0.9
3,748,246	+				-0.6
3,748,247	-				-0.6
3,748,247	-				-0.5
3,748,261	+				+0.1
3,748,261	+				-0.9
3,748,262	-				-0.6
3,748,272	-				+1.1
3,748,282	+				+1.1
3,748,282	+				-0.6
3,748,282	+				+1.1
3,748,282	+				-1.0
3,748,387	+				-1.0
3,748,387	+				+0.3
3,748,387	+				-1.5
3,748,387	+				-0.2
3,748,388	-				+0.1
3,748,613	+				-1.7
3,748,613	+				-0.3
3,748,614	-				+0.1
3,748,673	+				-0.8
3,748,674	-				-0.7
3,748,691	+		Pf6N2E2_3242	0.11	-0.5
3,748,692	-		Pf6N2E2_3242	0.11	-0.5
3,748,712	+		Pf6N2E2_3242	0.12	-1.5
3,748,712	+		Pf6N2E2_3242	0.12	-0.6
3,748,713	-		Pf6N2E2_3242	0.12	+1.1
3,748,715	+		Pf6N2E2_3242	0.13	+0.1
3,748,715	+		Pf6N2E2_3242	0.13	+1.1
3,748,715	+		Pf6N2E2_3242	0.13	-0.3
3,748,716	-		Pf6N2E2_3242	0.13	+1.1
3,748,766	+		Pf6N2E2_3242	0.16	-0.5
3,748,766	+		Pf6N2E2_3242	0.16	+0.1
3,748,766	+		Pf6N2E2_3242	0.16	+1.1
3,748,767	-		Pf6N2E2_3242	0.16	+1.1
3,748,767	-		Pf6N2E2_3242	0.16	+0.1
3,748,826	+		Pf6N2E2_3242	0.21	+1.1
3,748,826	+		Pf6N2E2_3242	0.21	-0.9
3,748,826	+		Pf6N2E2_3242	0.21	+0.7
3,748,826	+		Pf6N2E2_3242	0.21	+0.1
3,748,826	+		Pf6N2E2_3242	0.21	-0.7
3,748,827	-		Pf6N2E2_3242	0.21	-0.9
3,748,827	-		Pf6N2E2_3242	0.21	-0.6
3,748,827	-		Pf6N2E2_3242	0.21	-2.1
3,748,827	-		Pf6N2E2_3242	0.21	+0.1
3,748,827	-		Pf6N2E2_3242	0.21	+0.1
3,748,827	-		Pf6N2E2_3242	0.21	+1.1
3,748,827	-		Pf6N2E2_3242	0.21	-0.5
3,748,827	-		Pf6N2E2_3242	0.21	-1.7
3,748,827	-		Pf6N2E2_3242	0.21	+0.1
3,748,827	-		Pf6N2E2_3242	0.21	-0.9
3,748,934	+		Pf6N2E2_3242	0.29	-0.5
3,748,961	+		Pf6N2E2_3242	0.31	+1.1
3,748,961	+		Pf6N2E2_3242	0.31	-0.5
3,748,962	-		Pf6N2E2_3242	0.31	-0.5
3,748,979	+		Pf6N2E2_3242	0.32	+1.1
3,748,979	+		Pf6N2E2_3242	0.32	+1.1
3,748,979	+		Pf6N2E2_3242	0.32	-0.7
3,748,979	+		Pf6N2E2_3242	0.32	-1.3
3,748,979	+		Pf6N2E2_3242	0.32	-0.7
3,748,979	+		Pf6N2E2_3242	0.32	+1.1
3,748,979	+		Pf6N2E2_3242	0.32	+1.1
3,748,979	+		Pf6N2E2_3242	0.32	+1.1
3,748,980	-		Pf6N2E2_3242	0.32	-0.5
3,748,980	-		Pf6N2E2_3242	0.32	+0.1
3,748,980	-		Pf6N2E2_3242	0.32	+0.1
3,748,980	-		Pf6N2E2_3242	0.32	-0.9
3,748,980	-		Pf6N2E2_3242	0.32	+1.1
3,748,980	-		Pf6N2E2_3242	0.32	+1.1
3,748,980	-		Pf6N2E2_3242	0.32	+0.1
3,748,980	-		Pf6N2E2_3242	0.32	-0.6
3,748,980	-		Pf6N2E2_3242	0.32	+1.1
3,749,012	+		Pf6N2E2_3242	0.34	+1.1
3,749,033	+		Pf6N2E2_3242	0.36	-2.1
3,749,033	+		Pf6N2E2_3242	0.36	-0.1
3,749,033	+		Pf6N2E2_3242	0.36	-0.9
3,749,033	+		Pf6N2E2_3242	0.36	+0.1
3,749,033	+		Pf6N2E2_3242	0.36	+1.1
3,749,033	+		Pf6N2E2_3242	0.36	-0.2
3,749,033	+		Pf6N2E2_3242	0.36	-1.3
3,749,033	+		Pf6N2E2_3242	0.36	+0.1
3,749,033	+		Pf6N2E2_3242	0.36	-0.5
3,749,033	+		Pf6N2E2_3242	0.36	-0.9
3,749,033	+		Pf6N2E2_3242	0.36	+0.1