Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3012

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
3,499,435	+		Pf6N2E2_3010	0.47	+1.0
3,499,435	+		Pf6N2E2_3010	0.47	+0.0
3,499,435	+		Pf6N2E2_3010	0.47	+1.0
3,499,435	+		Pf6N2E2_3010	0.47	+0.4
3,499,436	-		Pf6N2E2_3010	0.47	-0.8
3,499,436	-		Pf6N2E2_3010	0.47	-0.9
3,499,851	+		Pf6N2E2_3010	0.75	+1.0
3,499,852	-		Pf6N2E2_3010	0.75	+0.0
3,499,864	+		Pf6N2E2_3010	0.76	+1.0
3,499,864	+		Pf6N2E2_3010	0.76	-1.0
3,499,864	+		Pf6N2E2_3010	0.76	-0.6
3,499,865	-		Pf6N2E2_3010	0.76	-0.8
3,499,865	-		Pf6N2E2_3010	0.76	+0.0
3,499,865	-		Pf6N2E2_3010	0.76	+0.6
3,499,996	+		Pf6N2E2_3010	0.85	+2.0
3,499,996	+		Pf6N2E2_3010	0.85	-1.0
3,499,997	-		Pf6N2E2_3010	0.85	+1.0
3,500,142	-				-0.6
3,500,223	+				-0.6
3,500,270	-		Pf6N2E2_3011	0.26	-0.4
3,500,411	-				+0.0
3,500,628	+		Pf6N2E2_3012	0.39	+1.0
3,500,628	+		Pf6N2E2_3012	0.39	-1.3
3,500,629	-		Pf6N2E2_3012	0.39	-0.6
3,500,657	+		Pf6N2E2_3012	0.44	+1.0
3,500,861	+		Pf6N2E2_3012	0.79	-1.6
3,500,861	+		Pf6N2E2_3012	0.79	-1.5
3,500,861	+		Pf6N2E2_3012	0.79	+1.0
3,500,861	+		Pf6N2E2_3012	0.79	+0.0
3,500,862	-		Pf6N2E2_3012	0.79	+0.0
3,500,862	-		Pf6N2E2_3012	0.79	+0.0
3,500,862	-		Pf6N2E2_3012	0.79	+0.0
3,500,862	-		Pf6N2E2_3012	0.79	-0.7
3,501,154	-				+1.0
3,501,240	-		Pf6N2E2_3013	0.13	-0.4
3,501,456	+		Pf6N2E2_3013	0.34	-0.7
3,501,456	+		Pf6N2E2_3013	0.34	+0.0
3,501,539	+		Pf6N2E2_3013	0.42	+0.1
3,501,539	+		Pf6N2E2_3013	0.42	-1.0
3,501,540	-		Pf6N2E2_3013	0.42	+1.0
3,501,597	+		Pf6N2E2_3013	0.48	+0.0
3,501,597	+		Pf6N2E2_3013	0.48	+0.0
3,501,597	+		Pf6N2E2_3013	0.48	-0.9
3,501,597	+		Pf6N2E2_3013	0.48	-0.2
3,501,597	+		Pf6N2E2_3013	0.48	+1.0
3,501,598	-		Pf6N2E2_3013	0.48	+0.0
3,501,598	-		Pf6N2E2_3013	0.48	-1.7
3,501,598	-		Pf6N2E2_3013	0.48	+0.0
3,501,598	-		Pf6N2E2_3013	0.48	+0.4
3,501,598	-		Pf6N2E2_3013	0.48	+0.0
3,501,598	-		Pf6N2E2_3013	0.48	+0.0
3,501,630	+		Pf6N2E2_3013	0.51	-0.7
3,501,631	-		Pf6N2E2_3013	0.51	+0.4
3,501,631	-		Pf6N2E2_3013	0.51	+1.0