Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2747

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
3,238,790	-		Pf6N2E2_2746	0.21	-0.0
3,238,790	-		Pf6N2E2_2746	0.21	+1.0
3,238,790	-		Pf6N2E2_2746	0.21	+1.0
3,238,790	-		Pf6N2E2_2746	0.21	+1.0
3,238,790	-		Pf6N2E2_2746	0.21	-0.0
3,238,790	-		Pf6N2E2_2746	0.21	+1.0
3,238,793	-		Pf6N2E2_2746	0.21	+1.0
3,238,793	-		Pf6N2E2_2746	0.21	-2.5
3,238,793	-		Pf6N2E2_2746	0.21	-0.6
3,238,793	-		Pf6N2E2_2746	0.21	+1.0
3,238,793	-		Pf6N2E2_2746	0.21	+1.0
3,238,793	-		Pf6N2E2_2746	0.21	+1.0
3,238,793	-		Pf6N2E2_2746	0.21	+1.0
3,239,114	-		Pf6N2E2_2746	0.50	+1.0
3,239,114	-		Pf6N2E2_2746	0.50	+1.0
3,239,114	-		Pf6N2E2_2746	0.50	-0.0
3,239,114	-		Pf6N2E2_2746	0.50	-1.0
3,239,390	-		Pf6N2E2_2746	0.75	-1.8
3,239,441	-		Pf6N2E2_2746	0.79	+1.0
3,239,441	-		Pf6N2E2_2746	0.79	+1.0
3,239,585	-				+1.0
3,239,631	-				+1.0
3,239,631	-				+1.0
3,239,689	-				-1.3
3,240,633	+				-0.6
3,240,633	+				+1.0
3,240,634	-				+1.0
3,240,634	-				+1.0
3,240,696	+				-1.5
3,240,696	+				+1.0
3,240,696	+				-2.1
3,240,697	-				+1.0
3,240,697	-				-1.6
3,240,697	-				-0.8
3,240,953	-		Pf6N2E2_2748	0.13	-0.0
3,241,172	+		Pf6N2E2_2748	0.52	-0.0
3,241,172	+		Pf6N2E2_2748	0.52	+1.0
3,241,173	-		Pf6N2E2_2748	0.52	-0.1
3,241,181	+		Pf6N2E2_2748	0.53	+0.1
3,241,181	+		Pf6N2E2_2748	0.53	+1.0
3,241,181	+		Pf6N2E2_2748	0.53	+1.0
3,241,181	+		Pf6N2E2_2748	0.53	+1.0
3,241,182	-		Pf6N2E2_2748	0.54	-1.6
3,241,182	-		Pf6N2E2_2748	0.54	+1.0
3,241,182	-		Pf6N2E2_2748	0.54	+1.0
3,241,182	-		Pf6N2E2_2748	0.54	-0.3
3,241,182	-		Pf6N2E2_2748	0.54	-0.0
3,241,182	-		Pf6N2E2_2748	0.54	-0.6
3,241,277	+		Pf6N2E2_2748	0.71	-0.0
3,241,277	+		Pf6N2E2_2748	0.71	-0.6
3,241,277	+		Pf6N2E2_2748	0.71	-1.6
3,241,277	+		Pf6N2E2_2748	0.71	-0.0
3,241,277	+		Pf6N2E2_2748	0.71	-0.0
3,241,277	+		Pf6N2E2_2748	0.71	+1.0
3,241,278	-		Pf6N2E2_2748	0.71	-0.6
3,241,278	-		Pf6N2E2_2748	0.71	-1.8
3,241,278	-		Pf6N2E2_2748	0.71	+1.0
3,241,278	-		Pf6N2E2_2748	0.71	-0.0
3,241,278	-		Pf6N2E2_2748	0.71	+1.0
3,241,278	-		Pf6N2E2_2748	0.71	-0.4
3,241,439	+				-0.6
3,241,439	+				-0.0
3,241,439	+				+1.0
3,241,439	+				-0.6
3,241,439	+				+1.0
3,241,440	-				-0.3
3,241,440	-				-0.4
3,241,440	-				+1.0
3,241,440	-				-1.8
3,241,440	-				-0.6
3,241,554	+		Pf6N2E2_2749	0.22	-0.0
3,241,554	+		Pf6N2E2_2749	0.22	-1.0
3,241,554	+		Pf6N2E2_2749	0.22	-0.1
3,241,554	+		Pf6N2E2_2749	0.22	-0.3
3,241,554	+		Pf6N2E2_2749	0.22	-1.3
3,241,555	-		Pf6N2E2_2749	0.22	-0.6
3,241,555	-		Pf6N2E2_2749	0.22	-0.0
3,241,555	-		Pf6N2E2_2749	0.22	-0.0
3,241,560	+		Pf6N2E2_2749	0.23	-0.0
3,241,561	-		Pf6N2E2_2749	0.23	+1.0
3,241,561	-		Pf6N2E2_2749	0.23	+1.0
3,241,561	-		Pf6N2E2_2749	0.23	-0.0