Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2326

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,747,067	+				-1.4
2,747,067	+				+1.0
2,747,067	+				-0.6
2,747,121	-				-0.0
2,747,180	+				+1.0
2,747,180	+				+1.0
2,747,180	+				-0.8
2,747,181	-				-0.3
2,747,181	-				-0.9
2,747,181	-				+1.0
2,747,181	-				+1.0
2,747,188	-				-0.6
2,747,194	+				-0.0
2,747,195	-				-1.2
2,747,333	-		Pf6N2E2_2325	0.23	-0.9
2,747,333	-		Pf6N2E2_2325	0.23	-0.0
2,747,333	-		Pf6N2E2_2325	0.23	-0.0
2,747,333	-		Pf6N2E2_2325	0.23	-1.5
2,747,333	-		Pf6N2E2_2325	0.23	-0.6
2,747,488	+		Pf6N2E2_2325	0.48	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	-0.0
2,747,521	+		Pf6N2E2_2325	0.53	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	-0.6
2,747,522	-		Pf6N2E2_2325	0.53	+1.0
2,747,522	-		Pf6N2E2_2325	0.53	-0.4
2,747,635	-		Pf6N2E2_2325	0.71	+1.0
2,747,737	-		Pf6N2E2_2325	0.88	-1.0
2,747,737	-		Pf6N2E2_2325	0.88	+1.0
2,747,737	-		Pf6N2E2_2325	0.88	-0.0
2,747,813	+				+1.0
2,747,813	+				+1.0
2,747,813	+				+1.0
2,747,813	+				-1.0
2,747,814	-				+1.0
2,747,814	-				-0.0
2,747,832	-				-0.0
2,747,832	-				-0.0
2,747,834	-				-1.0
2,747,860	-				-1.2
2,748,035	-		Pf6N2E2_2326	0.17	-0.0
2,748,051	-		Pf6N2E2_2326	0.18	-0.5
2,748,139	+		Pf6N2E2_2326	0.27	-0.6
2,748,139	+		Pf6N2E2_2326	0.27	-1.0
2,748,139	+		Pf6N2E2_2326	0.27	-1.0
2,748,140	-		Pf6N2E2_2326	0.27	-1.0
2,748,140	-		Pf6N2E2_2326	0.27	+1.0
2,748,230	-		Pf6N2E2_2326	0.36	-0.0
2,748,232	+		Pf6N2E2_2326	0.36	+1.0
2,748,233	-		Pf6N2E2_2326	0.36	+1.0
2,748,233	-		Pf6N2E2_2326	0.36	-1.3
2,748,233	-		Pf6N2E2_2326	0.36	+1.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.6
2,748,233	-		Pf6N2E2_2326	0.36	-0.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.0
2,748,233	-		Pf6N2E2_2326	0.36	+1.0
2,748,233	-		Pf6N2E2_2326	0.36	+1.0
2,748,233	-		Pf6N2E2_2326	0.36	-0.9
2,748,233	-		Pf6N2E2_2326	0.36	-1.3
2,748,331	+		Pf6N2E2_2326	0.45	-0.0
2,748,331	+		Pf6N2E2_2326	0.45	+1.0
2,748,331	+		Pf6N2E2_2326	0.45	-0.8
2,748,332	-		Pf6N2E2_2326	0.45	-0.0
2,748,332	-		Pf6N2E2_2326	0.45	-0.0
2,748,332	-		Pf6N2E2_2326	0.45	+1.0
2,748,332	-		Pf6N2E2_2326	0.45	+2.0
2,748,332	-		Pf6N2E2_2326	0.45	-1.0
2,748,484	+		Pf6N2E2_2326	0.60	+1.0
2,748,484	+		Pf6N2E2_2326	0.60	-0.6
2,748,484	+		Pf6N2E2_2326	0.60	-1.4
2,748,484	+		Pf6N2E2_2326	0.60	+1.0
2,748,485	-		Pf6N2E2_2326	0.60	-0.0
2,748,485	-		Pf6N2E2_2326	0.60	-0.7
2,748,706	+		Pf6N2E2_2326	0.82	+1.0
2,748,707	-		Pf6N2E2_2326	0.82	-0.0
2,748,707	-		Pf6N2E2_2326	0.82	+1.0
2,748,739	+		Pf6N2E2_2326	0.85	-0.6
2,748,739	+		Pf6N2E2_2326	0.85	-0.0
2,748,739	+		Pf6N2E2_2326	0.85	-1.1
2,748,740	-		Pf6N2E2_2326	0.85	+1.0
2,748,740	-		Pf6N2E2_2326	0.85	-0.0
2,748,928	+				+1.0
2,748,928	+				-0.6
2,748,928	+				-0.2
2,748,928	+				+1.0
2,748,928	+				-1.2
2,748,928	+				-0.8
2,748,929	-				-2.2
2,748,929	-				+1.0
2,748,929	-				+1.0
2,748,929	-				-1.8
2,748,929	-				-0.5
2,748,929	-				-0.6
2,748,929	-				+1.3
2,748,929	-				+1.0
2,748,930	+				+1.0
2,748,930	+				-1.1
2,749,076	+				-0.0
2,749,077	-				+1.0
2,749,085	+				-1.2
2,749,086	-				-1.0
2,749,086	-				+0.4
2,749,086	-				-0.2
2,749,101	+				-3.5
2,749,528	+				-0.7
2,749,528	+				+1.0
2,749,529	-				-0.0
2,749,529	-				-0.0
2,749,536	+				+1.0
2,749,577	-				+1.0