Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2296

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,718,291	+		Pf6N2E2_2295	0.63	+1.0
2,718,291	+		Pf6N2E2_2295	0.63	-0.6
2,718,291	+		Pf6N2E2_2295	0.63	-0.0
2,718,291	+		Pf6N2E2_2295	0.63	+1.0
2,718,292	-		Pf6N2E2_2295	0.63	+1.0
2,718,292	-		Pf6N2E2_2295	0.63	+1.4
2,718,292	-		Pf6N2E2_2295	0.63	-0.0
2,718,292	-		Pf6N2E2_2295	0.63	-0.7
2,718,333	+		Pf6N2E2_2295	0.66	+1.0
2,718,334	-		Pf6N2E2_2295	0.66	-0.0
2,718,334	-		Pf6N2E2_2295	0.66	-0.9
2,718,334	-		Pf6N2E2_2295	0.66	+1.0
2,718,334	-		Pf6N2E2_2295	0.66	+1.0
2,718,417	-		Pf6N2E2_2295	0.70	+1.0
2,718,589	+		Pf6N2E2_2295	0.80	+0.2
2,718,589	+		Pf6N2E2_2295	0.80	+1.0
2,718,589	+		Pf6N2E2_2295	0.80	-1.0
2,718,589	+		Pf6N2E2_2295	0.80	+1.0
2,718,590	-		Pf6N2E2_2295	0.80	+1.0
2,718,590	-		Pf6N2E2_2295	0.80	-0.0
2,718,603	+		Pf6N2E2_2295	0.81	-0.7
2,718,622	-		Pf6N2E2_2295	0.82	-0.0
2,718,622	-		Pf6N2E2_2295	0.82	-0.6
2,718,622	-		Pf6N2E2_2295	0.82	+1.0
2,718,622	-		Pf6N2E2_2295	0.82	+1.0
2,718,622	-		Pf6N2E2_2295	0.82	+1.0
2,718,829	+				+0.2
2,718,829	+				-1.4
2,718,829	+				-0.8
2,718,829	+				-1.6
2,718,829	+				-1.5
2,718,830	-				-0.6
2,718,833	-				-0.7
2,718,911	+				+1.0
2,718,911	+				+1.0
2,718,911	+				-0.0
2,719,029	-				-0.6
2,719,032	+				-0.5
2,719,032	+				+1.0
2,719,033	-				+1.0
2,719,033	-				+1.0
2,719,054	+				+1.0
2,719,054	+				-0.3
2,719,054	+				+1.0
2,719,055	-				+1.0
2,719,128	+				-0.6
2,719,128	+				+1.0
2,719,128	+				-1.5
2,719,128	+				-0.0
2,719,128	+				+1.0
2,719,129	-				+1.0
2,719,129	-				+1.0
2,719,164	+				+1.0
2,719,164	+				-1.4
2,719,164	+				+1.0
2,719,170	-				+0.5
2,719,236	+		Pf6N2E2_2296	0.21	-1.0
2,719,236	+		Pf6N2E2_2296	0.21	+1.0
2,719,236	+		Pf6N2E2_2296	0.21	+1.0
2,719,299	+		Pf6N2E2_2296	0.56	-1.7
2,719,379	+				-0.5
2,719,423	+				-0.0
2,719,423	+				-1.3
2,719,423	+				-0.7
2,719,424	-				-0.6
2,719,424	-				-0.6