Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1381

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,620,097	+				+0.8
1,620,097	+				-1.2
1,620,098	-				-0.2
1,620,098	-				+0.8
1,620,113	-				+0.8
1,620,149	-				+0.8
1,620,236	+				-1.2
1,620,236	+				+0.8
1,620,236	+				+0.8
1,620,258	+				-0.3
1,620,259	-				+0.8
1,620,259	-				-0.8
1,620,259	-				+0.8
1,620,282	+				+0.8
1,620,334	+				+0.3
1,620,334	+				-0.2
1,620,365	-				-0.2
1,620,365	-				+0.8
1,620,365	-				-0.2
1,620,395	+				-1.2
1,620,396	-				-0.4
1,620,398	+				-1.1
1,620,398	+				+0.8
1,620,399	-				+0.8
1,620,493	-				-0.2
1,620,595	+				+0.8
1,620,596	-				-3.9
1,620,644	+				+0.8
1,620,644	+				+0.8
1,620,677	-				-0.2
1,620,937	+		Pf6N2E2_1381	0.24	+0.8
1,620,937	+		Pf6N2E2_1381	0.24	-3.2
1,620,937	+		Pf6N2E2_1381	0.24	-0.2
1,620,937	+		Pf6N2E2_1381	0.24	+0.8
1,620,937	+		Pf6N2E2_1381	0.24	-0.2
1,620,937	+		Pf6N2E2_1381	0.24	+0.8
1,620,937	+				+0.8
1,620,938	-		Pf6N2E2_1381	0.24	-3.0
1,620,938	-		Pf6N2E2_1381	0.24	-0.2
1,620,938	-		Pf6N2E2_1381	0.24	-1.2
1,620,938	-		Pf6N2E2_1381	0.24	+0.8
1,620,938	-		Pf6N2E2_1381	0.24	+0.8
1,620,938	-		Pf6N2E2_1381	0.24	-0.2
1,620,940	+		Pf6N2E2_1381	0.25	-0.2
1,620,941	-		Pf6N2E2_1381	0.25	-1.7
1,621,024	+		Pf6N2E2_1381	0.30	-0.2
1,621,025	-		Pf6N2E2_1381	0.30	-1.0
1,621,025	-		Pf6N2E2_1381	0.30	+0.8
1,621,604	+		Pf6N2E2_1381	0.68	-0.7
1,621,604	+		Pf6N2E2_1381	0.68	+0.8
1,621,708	+		Pf6N2E2_1381	0.75	+0.8
1,621,984	+				-1.2
1,621,984	+				-2.5
1,621,985	-				+0.8
1,622,080	+				+0.8
1,622,080	+				-0.2
1,622,141	+				+0.8
1,622,141	+				-2.9
1,622,142	-				+0.8
1,622,142	-				-0.7
1,622,192	+				-0.2
1,622,246	-				-1.1
1,622,529	+				+0.8
1,622,529	+				+0.8
1,622,529	+				-0.1
1,622,530	-				-1.2
1,622,704	-		Pf6N2E2_1382	0.18	+0.8
1,622,765	-		Pf6N2E2_1382	0.21	+0.8
1,622,765	-		Pf6N2E2_1382	0.21	+0.8
1,622,765	-		Pf6N2E2_1382	0.21	-1.5
1,622,765	-		Pf6N2E2_1382	0.21	-0.7
1,622,766	+		Pf6N2E2_1382	0.21	-0.7
1,622,766	+		Pf6N2E2_1382	0.21	+0.1
1,622,766	+				+0.8
1,622,766	+		Pf6N2E2_1382	0.21	-0.2
1,622,767	-		Pf6N2E2_1382	0.21	+0.8
1,622,767	-		Pf6N2E2_1382	0.21	+0.8
1,622,767	-		Pf6N2E2_1382	0.21	+0.8
1,622,767	-		Pf6N2E2_1382	0.21	+0.8
1,622,767	-		Pf6N2E2_1382	0.21	+0.8
1,622,826	+		Pf6N2E2_1382	0.24	+0.5
1,622,877	+		Pf6N2E2_1382	0.27	+0.1
1,622,877	+		Pf6N2E2_1382	0.27	+0.8
1,622,878	-		Pf6N2E2_1382	0.27	-1.0
1,622,878	-		Pf6N2E2_1382	0.27	-0.3
1,623,006	+		Pf6N2E2_1382	0.35	+0.8
1,623,006	+		Pf6N2E2_1382	0.35	+0.8
1,623,007	-		Pf6N2E2_1382	0.35	+0.8