Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_939

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,105,453	+				+0.9
1,105,472	-				-0.7
1,105,594	-		Pf6N2E2_938	0.28	+0.9
1,105,594	-		Pf6N2E2_938	0.28	+0.9
1,105,594	-		Pf6N2E2_938	0.28	-1.1
1,105,594	-		Pf6N2E2_938	0.28	-0.4
1,105,594	-		Pf6N2E2_938	0.28	-0.6
1,105,612	+		Pf6N2E2_938	0.31	-0.7
1,105,612	+		Pf6N2E2_938	0.31	+0.9
1,105,613	-		Pf6N2E2_938	0.32	+0.9
1,105,613	-		Pf6N2E2_938	0.32	-0.7
1,105,613	-		Pf6N2E2_938	0.32	-0.1
1,105,613	-		Pf6N2E2_938	0.32	-0.5
1,105,613	-		Pf6N2E2_938	0.32	-0.4
1,105,615	-		Pf6N2E2_938	0.32	+0.9
1,105,615	-		Pf6N2E2_938	0.32	-0.6
1,105,638	+		Pf6N2E2_938	0.36	+0.9
1,105,646	-		Pf6N2E2_938	0.37	-0.8
1,105,646	-				-1.0
1,105,646	-		Pf6N2E2_938	0.37	+0.9
1,105,719	+		Pf6N2E2_938	0.50	+0.9
1,105,720	-		Pf6N2E2_938	0.50	-0.7
1,105,720	-		Pf6N2E2_938	0.50	+0.1
1,106,067	+				-0.4
1,106,067	+				+0.9
1,106,068	-				+0.9
1,106,068	-				-0.1
1,106,095	-				+0.9
1,106,095	-				+2.9
1,106,095	-				+0.9
1,106,192	-				+0.9
1,106,257	+				+0.0
1,106,257	+				-0.3
1,106,257	+				-1.5
1,106,259	+				+0.9
1,106,259	+				+0.4
1,106,295	+				-0.7
1,106,295	+				-0.7
1,106,299	+				+0.9
1,106,299	+				+0.9
1,106,299	+				+0.9
1,106,299	+				-0.7
1,106,299	+				+0.9
1,106,299	+				-0.1
1,106,300	-				+0.9
1,106,372	+				-0.3
1,106,372	+				+0.9
1,106,524	+		Pf6N2E2_939	0.19	-0.1
1,106,525	-		Pf6N2E2_939	0.20	+0.9
1,106,592	+		Pf6N2E2_939	0.32	-2.3
1,106,593	-		Pf6N2E2_939	0.32	-1.9
1,106,673	+		Pf6N2E2_939	0.47	+0.9
1,106,674	-		Pf6N2E2_939	0.48	-0.1
1,107,055	+				-0.1
1,107,055	+				+0.9
1,107,055	+				-0.3
1,107,056	-				-0.1
1,107,101	+				+0.9
1,107,157	+				+0.9
1,107,158	-				+0.4
1,107,158	-				-0.7
1,107,164	+				-0.4
1,107,164	+				-0.7
1,107,164	+				+0.9
1,107,164	+				+0.9
1,107,164	+				-0.1
1,107,164	+				-0.1
1,107,164	+				+0.9
1,107,164	+				+0.9
1,107,165	-				-0.1
1,107,165	-				+0.9
1,107,165	-				+0.9
1,107,165	-				+0.9
1,107,165	-				-0.4
1,107,178	+				+0.9
1,107,340	-		Pf6N2E2_940	0.15	+0.8
1,107,340	-		Pf6N2E2_940	0.15	-0.2
1,107,343	+		Pf6N2E2_940	0.16	-2.7
1,107,344	-		Pf6N2E2_940	0.16	+0.5
1,107,434	+		Pf6N2E2_940	0.24	+0.0
1,107,629	+		Pf6N2E2_940	0.43	-0.2
1,107,654	+		Pf6N2E2_940	0.46	+0.8
1,107,708	+		Pf6N2E2_940	0.51	+0.3
1,107,708	+		Pf6N2E2_940	0.51	-0.2
1,107,708	+		Pf6N2E2_940	0.51	+0.8
1,107,709	-		Pf6N2E2_940	0.51	-0.9
1,107,937	+		Pf6N2E2_940	0.73	+0.8
1,107,937	+		Pf6N2E2_940	0.73	+0.8