Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_719

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
822,220	+				-0.2
822,220	+				+0.8
822,220	+				-0.2
822,221	-				+0.8
822,650	-		Pf6N2E2_718	0.38	+0.8
822,732	-		Pf6N2E2_718	0.50	+0.8
822,732	-		Pf6N2E2_718	0.50	+0.8
822,732	-		Pf6N2E2_718	0.50	+0.2
822,782	-		Pf6N2E2_718	0.58	+0.8
823,067	+				+0.8
823,067	+				+0.8
823,067	+				+0.8
823,068	-				+0.8
823,068	-				-0.2
823,084	-				+0.8
823,193	-				-0.2
823,303	+		Pf6N2E2_719	0.29	+0.8
823,308	-		Pf6N2E2_719	0.30	-2.0
823,886	-		Pf6N2E2_720	0.16	+0.8
824,228	-		Pf6N2E2_720	0.43	+0.8
824,228	-		Pf6N2E2_720	0.43	+0.8
824,308	+		Pf6N2E2_720	0.50	-0.2
824,308	+		Pf6N2E2_720	0.50	+0.8
824,309	-		Pf6N2E2_720	0.50	+0.8
824,309	-		Pf6N2E2_720	0.50	+0.8
824,325	+		Pf6N2E2_720	0.51	-0.2
824,688	-		Pf6N2E2_720	0.81	-0.2