Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6007

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
6,823,465	-		Pf6N2E2_6006	0.29	+1.0
6,823,465	-		Pf6N2E2_6006	0.29	-0.4
6,823,465	-		Pf6N2E2_6006	0.29	-0.4
6,823,556	+		Pf6N2E2_6006	0.45	+1.0
6,823,556	+		Pf6N2E2_6006	0.45	+1.0
6,823,556	+		Pf6N2E2_6006	0.45	-0.0
6,823,557	-		Pf6N2E2_6006	0.45	-0.0
6,823,557	-		Pf6N2E2_6006	0.45	+1.0
6,823,684	+		Pf6N2E2_6006	0.68	-0.6
6,823,684	+		Pf6N2E2_6006	0.68	+1.0
6,823,684	+		Pf6N2E2_6006	0.68	+1.0
6,823,792	+		Pf6N2E2_6006	0.87	+1.0
6,823,793	-		Pf6N2E2_6006	0.87	-0.0
6,823,852	-				-0.0
6,823,863	+				-0.3
6,823,863	+				+1.0
6,823,947	+				+1.0
6,823,948	-				-0.0
6,823,990	+				-0.0
6,824,055	-				-0.0
6,824,165	+				-1.4
6,824,170	-				+1.0
6,824,193	-				+1.0
6,824,199	+				+1.0
6,824,232	+				-0.0
6,824,446	+		Pf6N2E2_6007	0.27	+1.0
6,824,446	+		Pf6N2E2_6007	0.27	+1.0
6,824,446	+		Pf6N2E2_6007	0.27	-0.0
6,824,446	+		Pf6N2E2_6007	0.27	-1.8
6,824,447	-		Pf6N2E2_6007	0.27	-0.6
6,824,447	-		Pf6N2E2_6007	0.27	+1.0
6,824,644	-		Pf6N2E2_6007	0.63	+1.0
6,824,783	-		Pf6N2E2_6007	0.88	-1.4
6,824,871	+				+1.0
6,825,030	+				+1.0
6,825,030	+				+1.0
6,825,031	-				+3.0
6,825,223	+		Pf6N2E2_6008	0.23	+1.0
6,825,223	+		Pf6N2E2_6008	0.23	-0.3
6,825,223	+		Pf6N2E2_6008	0.23	+1.0
6,825,223	+		Pf6N2E2_6008	0.23	-0.7
6,825,260	+		Pf6N2E2_6008	0.27	+1.0
6,825,260	+		Pf6N2E2_6008	0.27	+1.0
6,825,261	-		Pf6N2E2_6008	0.27	-0.6
6,825,261	-		Pf6N2E2_6008	0.27	-0.7
6,825,283	+		Pf6N2E2_6008	0.29	+1.0
6,825,283	+		Pf6N2E2_6008	0.29	+1.0
6,825,283	+		Pf6N2E2_6008	0.29	+1.0
6,825,283	+		Pf6N2E2_6008	0.29	-0.0
6,825,283	+		Pf6N2E2_6008	0.29	-0.0
6,825,283	+		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	-0.2
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	-0.0
6,825,284	-		Pf6N2E2_6008	0.29	-0.8
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	-0.2
6,825,284	-		Pf6N2E2_6008	0.29	-1.8
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	+0.1
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,284	-		Pf6N2E2_6008	0.29	+1.0
6,825,285	+		Pf6N2E2_6008	0.29	-1.6
6,825,355	+		Pf6N2E2_6008	0.37	-0.6
6,825,355	+		Pf6N2E2_6008	0.37	-1.0
6,825,355	+		Pf6N2E2_6008	0.37	-0.0
6,825,355	+		Pf6N2E2_6008	0.37	-1.5
6,825,355	+		Pf6N2E2_6008	0.37	-0.4
6,825,356	-		Pf6N2E2_6008	0.37	+1.0
6,825,356	-		Pf6N2E2_6008	0.37	-0.3
6,825,356	-		Pf6N2E2_6008	0.37	+1.0
6,825,359	+		Pf6N2E2_6008	0.38	+1.0
6,825,359	+		Pf6N2E2_6008	0.38	+1.0
6,825,360	-		Pf6N2E2_6008	0.38	+1.0
6,825,360	-		Pf6N2E2_6008	0.38	+1.0
6,825,360	-		Pf6N2E2_6008	0.38	+1.0
6,825,382	+		Pf6N2E2_6008	0.40	+1.0
6,825,383	-		Pf6N2E2_6008	0.40	-0.6
6,825,421	+		Pf6N2E2_6008	0.44	+0.3
6,825,421	+		Pf6N2E2_6008	0.44	-0.0
6,825,421	+		Pf6N2E2_6008	0.44	-0.4
6,825,421	+		Pf6N2E2_6008	0.44	-0.4
6,825,421	+		Pf6N2E2_6008	0.44	+1.0
6,825,421	+		Pf6N2E2_6008	0.44	+1.0
6,825,422	-		Pf6N2E2_6008	0.44	+1.0
6,825,422	-		Pf6N2E2_6008	0.44	-1.0
6,825,461	+		Pf6N2E2_6008	0.49	-0.0
6,825,475	+		Pf6N2E2_6008	0.50	-1.0
6,825,475	+		Pf6N2E2_6008	0.50	-1.4
6,825,476	-		Pf6N2E2_6008	0.50	-0.7
6,825,476	-		Pf6N2E2_6008	0.50	-0.6
6,825,499	+		Pf6N2E2_6008	0.53	+1.0
6,825,500	-		Pf6N2E2_6008	0.53	+1.0
6,825,514	+		Pf6N2E2_6008	0.55	+1.0
6,825,613	+		Pf6N2E2_6008	0.66	+1.0
6,825,613	+		Pf6N2E2_6008	0.66	+1.0
6,825,613	+		Pf6N2E2_6008	0.66	-0.0
6,825,613	+		Pf6N2E2_6008	0.66	-0.6
6,825,614	-		Pf6N2E2_6008	0.66	-0.6
6,825,677	+		Pf6N2E2_6008	0.73	+1.0
6,825,677	+		Pf6N2E2_6008	0.73	+0.3
6,825,677	+		Pf6N2E2_6008	0.73	-0.0
6,825,677	+		Pf6N2E2_6008	0.73	+1.0
6,825,677	+		Pf6N2E2_6008	0.73	+0.1
6,825,678	-		Pf6N2E2_6008	0.73	-1.0
6,825,678	-		Pf6N2E2_6008	0.73	-0.0
6,825,678	-		Pf6N2E2_6008	0.73	-0.3
6,825,679	+		Pf6N2E2_6008	0.73	-0.5
6,825,679	+		Pf6N2E2_6008	0.73	+1.0
6,825,679	+		Pf6N2E2_6008	0.73	+1.0
6,825,679	+		Pf6N2E2_6008	0.73	-0.2
6,825,679	+		Pf6N2E2_6008	0.73	-0.4
6,825,679	+				+1.0
6,825,687	-		Pf6N2E2_6008	0.74	+1.0
6,825,687	-		Pf6N2E2_6008	0.74	-1.1
6,825,743	+		Pf6N2E2_6008	0.80	-0.6
6,825,768	-		Pf6N2E2_6008	0.83	+1.0
6,825,787	+		Pf6N2E2_6008	0.85	-0.0
6,825,787	+		Pf6N2E2_6008	0.85	+1.0
6,825,787	+		Pf6N2E2_6008	0.85	-0.2