Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5791

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
6,608,830	+		Pf6N2E2_5790	0.54	-0.0
6,608,831	-		Pf6N2E2_5790	0.54	+1.0
6,608,831	-		Pf6N2E2_5790	0.54	-0.0
6,608,920	+		Pf6N2E2_5790	0.62	-0.6
6,608,921	-		Pf6N2E2_5790	0.62	+1.0
6,608,964	+		Pf6N2E2_5790	0.66	-0.7
6,608,964	+		Pf6N2E2_5790	0.66	-0.6
6,608,964	+		Pf6N2E2_5790	0.66	-0.1
6,608,965	-		Pf6N2E2_5790	0.66	+1.0
6,608,965	-		Pf6N2E2_5790	0.66	-0.0
6,608,989	+		Pf6N2E2_5790	0.69	+1.0
6,608,989	+		Pf6N2E2_5790	0.69	-1.4
6,608,990	-		Pf6N2E2_5790	0.69	+1.0
6,609,137	-		Pf6N2E2_5790	0.82	-0.0
6,609,294	+				+1.0
6,609,334	+				-0.0
6,609,334	+				+1.0
6,609,335	-				-0.0
6,609,374	+				-0.6
6,609,375	-				+1.0
6,609,375	-				-0.6
6,609,385	+				+1.0
6,609,385	+				-0.6
6,609,385	+				-0.8
6,609,385	+				-0.6
6,609,386	-				+1.0
6,609,386	-				+1.0
6,609,400	-				-0.0
6,609,400	-				-0.6
6,609,400	-				+1.0
6,609,477	+				-0.6
6,609,483	+				+1.0
6,609,484	-				+1.0
6,609,589	-				-0.0
6,609,589	-				+1.0
6,609,661	+				-0.0
6,609,661	+				-0.0
6,609,661	+				-0.0
6,609,661	+				-0.0
6,609,665	+				+1.0
6,609,665	+				+1.0
6,609,857	-		Pf6N2E2_5791	0.25	-0.0
6,609,904	+		Pf6N2E2_5791	0.31	-0.6
6,609,905	-		Pf6N2E2_5791	0.31	-0.6
6,609,966	+		Pf6N2E2_5791	0.39	+1.0
6,610,010	+		Pf6N2E2_5791	0.45	-0.0
6,610,010	+		Pf6N2E2_5791	0.45	-0.6
6,610,093	+		Pf6N2E2_5791	0.56	+1.0
6,610,093	+		Pf6N2E2_5791	0.56	-0.0
6,610,093	+		Pf6N2E2_5791	0.56	-0.0
6,610,093	+		Pf6N2E2_5791	0.56	-0.0
6,610,093	+		Pf6N2E2_5791	0.56	+1.0
6,610,105	+		Pf6N2E2_5791	0.58	+1.0
6,610,106	-		Pf6N2E2_5791	0.58	+1.0
6,610,120	+		Pf6N2E2_5791	0.60	-0.6
6,610,171	+		Pf6N2E2_5791	0.67	+1.0
6,610,171	+		Pf6N2E2_5791	0.67	-0.6
6,610,172	-		Pf6N2E2_5791	0.67	-1.6
6,610,183	+		Pf6N2E2_5791	0.68	-0.9
6,610,184	-		Pf6N2E2_5791	0.68	-0.0
6,610,195	+		Pf6N2E2_5791	0.70	+1.0
6,610,303	+		Pf6N2E2_5791	0.84	-0.2
6,610,303	+		Pf6N2E2_5791	0.84	-1.5
6,610,303	+		Pf6N2E2_5791	0.84	-1.8
6,610,303	+		Pf6N2E2_5791	0.84	-0.2
6,610,303	+		Pf6N2E2_5791	0.84	-1.1
6,610,303	+		Pf6N2E2_5791	0.84	-0.6
6,610,304	-		Pf6N2E2_5791	0.84	-0.0
6,610,304	-		Pf6N2E2_5791	0.84	-1.0
6,610,304	-		Pf6N2E2_5791	0.84	+1.0
6,610,304	-		Pf6N2E2_5791	0.84	-0.8
6,610,304	-		Pf6N2E2_5791	0.84	-1.0
6,610,395	-				+1.0
6,610,599	-				+1.0
6,610,599	-				-0.0
6,610,644	+				-3.5
6,610,644	+				+1.0
6,610,644	+				+1.0
6,610,644	+				-0.0
6,610,644	+				-1.1
6,610,644	+				-0.0
6,610,645	-				-0.0
6,610,645	-				+1.0
6,610,674	+				-0.0
6,610,674	+				-2.6
6,610,674	+				-0.6
6,610,674	+				+1.0
6,610,674	+				-0.0
6,610,674	+				-0.0
6,610,674	+				-0.0
6,610,674	+				-0.0
6,610,675	-				+1.0
6,610,675	-				+1.0
6,610,675	-				-1.6
6,610,675	-				+1.0
6,610,874	+				-0.6
6,611,195	+		Pf6N2E2_5793	0.27	-0.0
6,611,195	+		Pf6N2E2_5793	0.27	-0.0
6,611,195	+		Pf6N2E2_5793	0.27	+1.0
6,611,196	-		Pf6N2E2_5793	0.27	-0.0
6,611,196	-		Pf6N2E2_5793	0.27	+1.6
6,611,362	+		Pf6N2E2_5793	0.40	-0.6
6,611,362	+		Pf6N2E2_5793	0.40	-2.3
6,611,362	+		Pf6N2E2_5793	0.40	+1.0
6,611,418	-		Pf6N2E2_5793	0.44	-1.0