Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4988

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
5,754,220	+				-0.5
5,754,221	-				-0.4
5,754,238	+				-0.5
5,754,238	+				-0.6
5,754,238	+				-0.5
5,754,238	+				+0.1
5,754,238	+				+0.1
5,754,238	+				-0.5
5,754,238	+				+1.1
5,754,238	+				+1.1
5,754,238	+				-1.1
5,754,239	-				+1.1
5,754,239	-				+0.1
5,754,239	-				-0.6
5,754,275	+				-0.6
5,754,276	-				+0.1
5,754,276	-				+0.1
5,754,276	-				-0.6
5,754,276	-				+1.1
5,754,276	-				-0.2
5,754,286	+				+1.1
5,754,286	+				-1.7
5,754,287	-				-0.4
5,754,287	-				+0.1
5,754,287	-				-0.5
5,754,301	+				-0.6
5,754,301	+				+1.1
5,754,302	-				+1.1
5,754,302	-				+0.1
5,754,302	-				+0.6
5,754,302	-				+1.1
5,754,344	+				-0.9
5,754,345	-				+0.0
5,754,345	-				-1.0
5,754,345	-				-0.9
5,754,351	-				-0.3
5,754,351	-				+0.1
5,754,383	+				-0.5
5,754,383	+				-0.5
5,754,384	-				+1.1
5,754,384	-				-0.2
5,754,384	-				-0.5
5,754,540	-		Pf6N2E2_4987	0.42	+0.1
5,754,770	+				+0.1
5,754,771	-				+0.1
5,754,771	-				-0.3
5,754,771	-				+0.1
5,754,771	-				+1.1
5,754,797	+				+0.1
5,754,797	+				-0.2
5,754,798	-				+1.1
5,754,798	-				+1.1
5,754,798	-				-0.9
5,754,798	-				+1.1
5,754,875	+				+0.1
5,754,875	+				+1.1
5,754,876	-				+0.5
5,754,876	-				-0.5
5,754,876	-				+1.1
5,754,876	-				+1.1
5,754,896	+				+1.1
5,754,896	+				+1.1
5,754,896	+				-1.3
5,754,896	+				+0.1
5,754,896	+				+0.1
5,754,896	+				+0.1
5,754,896	+				-0.5
5,754,896	+				+0.1
5,754,896	+				+0.1
5,754,896	+				+0.1
5,754,897	-				+1.1
5,754,918	+				+0.1
5,754,949	+				+1.1
5,754,949	+				-0.5
5,754,949	+				-0.7
5,754,949	+				-0.5
5,754,949	+				-0.5
5,754,949	+				+1.1
5,754,949	+				+0.1
5,754,949	+				-0.9
5,754,949	+				-0.7
5,754,949	+				-1.6
5,754,949	+				-0.9
5,754,949	+				-1.9
5,754,949	+				-0.5
5,754,949	+				-0.7
5,754,949	+				-0.2
5,754,949	+				+1.1
5,754,950	-				-0.9
5,754,950	-				+0.4
5,754,950	-				+1.1
5,754,950	-				+0.1
5,754,950	-				-0.5
5,754,950	-				+1.1
5,754,950	-				-0.3
5,754,950	-				+1.1
5,754,950	-				+1.1
5,754,950	-				+1.1
5,754,950	-				+1.1
5,754,950	-				+0.1
5,754,950	-				+0.1
5,754,950	-				+1.1
5,754,950	-				+1.1
5,754,950	-				+0.1
5,754,950	-				+1.1
5,754,950	-				+0.1
5,754,950	-				-0.1
5,754,950	-				-0.4
5,754,951	+				-0.3
5,754,951	+				-0.5
5,754,951	+				-0.5
5,754,951	+				+1.1
5,754,952	-				-0.9
5,754,952	-				+1.1
5,754,952	-				-0.4
5,755,029	-				+0.1
5,755,312	+		Pf6N2E2_4988	0.49	-1.9
5,755,357	+		Pf6N2E2_4988	0.61	-1.2
5,755,357	+		Pf6N2E2_4988	0.61	-0.9
5,755,358	-		Pf6N2E2_4988	0.62	-1.6
5,755,358	-		Pf6N2E2_4988	0.62	+0.1
5,755,358	-		Pf6N2E2_4988	0.62	+0.1
5,755,358	-		Pf6N2E2_4988	0.62	+1.1
5,755,358	-		Pf6N2E2_4988	0.62	-0.5
5,755,573	-		Pf6N2E2_4989	0.11	-0.5
5,755,759	-		Pf6N2E2_4989	0.37	-1.3
5,755,759	-		Pf6N2E2_4989	0.37	-0.6
5,755,805	+		Pf6N2E2_4989	0.43	+0.1
5,755,805	+		Pf6N2E2_4989	0.43	+0.1
5,755,805	+		Pf6N2E2_4989	0.43	+1.1
5,755,806	-		Pf6N2E2_4989	0.44	-0.9
5,755,806	-		Pf6N2E2_4989	0.44	+0.1
5,756,093	+		Pf6N2E2_4989	0.84	-0.3
5,756,208	+				+0.1
5,756,221	-				+0.1
5,756,395	+		Pf6N2E2_4990	0.29	+0.1
5,756,487	+		Pf6N2E2_4990	0.45	+1.1