Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4829

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
5,582,367	+				+1.1
5,582,650	+		Pf6N2E2_4828	0.39	+2.1
5,582,650	+		Pf6N2E2_4828	0.39	+0.1
5,582,651	-		Pf6N2E2_4828	0.39	+0.1
5,582,651	-		Pf6N2E2_4828	0.39	-1.2
5,582,651	-		Pf6N2E2_4828	0.39	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	-0.5
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,688	+		Pf6N2E2_4828	0.45	+1.1
5,582,688	+		Pf6N2E2_4828	0.45	-1.4
5,582,689	-		Pf6N2E2_4828	0.45	+0.1
5,582,689	-		Pf6N2E2_4828	0.45	+0.1
5,582,733	+		Pf6N2E2_4828	0.52	+0.1
5,582,813	+		Pf6N2E2_4828	0.64	+1.1
5,582,850	+		Pf6N2E2_4828	0.70	-0.6
5,582,850	+		Pf6N2E2_4828	0.70	+0.1
5,582,851	-		Pf6N2E2_4828	0.70	+0.2
5,582,851	-		Pf6N2E2_4828	0.70	-0.9
5,582,851	-		Pf6N2E2_4828	0.70	-1.9
5,582,885	+		Pf6N2E2_4828	0.75	-0.5
5,582,885	+		Pf6N2E2_4828	0.75	+1.1
5,582,885	+		Pf6N2E2_4828	0.75	-0.5
5,582,885	+		Pf6N2E2_4828	0.75	+0.1
5,582,885	+		Pf6N2E2_4828	0.75	-0.5
5,582,885	+		Pf6N2E2_4828	0.75	+0.1
5,582,885	+		Pf6N2E2_4828	0.75	+1.1
5,582,885	+		Pf6N2E2_4828	0.75	+1.1
5,582,886	-		Pf6N2E2_4828	0.76	-0.5
5,582,886	-		Pf6N2E2_4828	0.76	+1.1
5,582,886	-		Pf6N2E2_4828	0.76	+0.1
5,582,893	+		Pf6N2E2_4828	0.77	-1.2
5,583,031	+				-0.5
5,583,031	+				+0.1
5,583,049	+				+1.1
5,583,049	+				+1.1
5,583,049	+				+0.1
5,583,102	+				+0.1
5,583,139	+				+1.1
5,583,140	-				+1.1
5,583,150	+				+0.1
5,583,150	+				-0.2
5,583,166	-				+1.1
5,583,166	-				+1.1
5,583,182	+				-1.7
5,583,182	+				-0.5
5,583,183	-				+1.1
5,583,186	+				-0.6
5,583,186	+				+0.1
5,583,186	+				+0.2
5,583,186	+				+1.1
5,583,186	+				+0.1
5,583,186	+				+0.1
5,583,186	+				-1.5
5,583,187	-				+1.1
5,583,196	+				-0.5
5,583,196	+				-0.9
5,583,196	+				-0.2
5,583,197	-				-0.3
5,583,210	+				-0.5
5,583,211	-				+1.1
5,583,211	-				+0.1
5,583,244	+				-1.2
5,583,244	+				-1.2
5,583,244	+				+1.1
5,583,244	+				+1.1
5,583,244	+				+1.1
5,583,244	+				+1.1
5,583,263	+				+1.1
5,583,263	+				-0.4
5,583,437	+		Pf6N2E2_4829	0.37	-0.7
5,583,539	+		Pf6N2E2_4829	0.61	+0.1
5,583,539	+		Pf6N2E2_4829	0.61	+1.1
5,583,627	+		Pf6N2E2_4829	0.82	-0.5
5,583,627	+		Pf6N2E2_4829	0.82	-1.2
5,583,627	+		Pf6N2E2_4829	0.82	+1.1
5,583,627	+		Pf6N2E2_4829	0.82	-1.5
5,583,627	+		Pf6N2E2_4829	0.82	+1.1
5,583,627	+		Pf6N2E2_4829	0.82	+0.1
5,583,627	+		Pf6N2E2_4829	0.82	-0.5
5,583,628	-		Pf6N2E2_4829	0.82	-1.8
5,583,628	-		Pf6N2E2_4829	0.82	+1.1
5,583,628	-		Pf6N2E2_4829	0.82	+0.1
5,583,682	-				+0.2
5,583,682	-				+0.1
5,583,778	+				-0.5
5,583,779	-				-0.6
5,583,812	+				-0.3
5,584,470	-				-0.7
5,584,470	-				-0.1
5,584,540	-				+1.1
5,584,540	-				+1.1
5,584,540	-				+0.1
5,584,585	+		Pf6N2E2_4831	0.12	+1.1
5,584,585	+		Pf6N2E2_4831	0.12	+0.1
5,584,585	+		Pf6N2E2_4831	0.12	+1.1
5,584,585	+		Pf6N2E2_4831	0.12	-0.5
5,584,585	+		Pf6N2E2_4831	0.12	+1.1
5,584,585	+		Pf6N2E2_4831	0.12	-0.6
5,584,585	+		Pf6N2E2_4831	0.12	-0.5
5,584,585	+		Pf6N2E2_4831	0.12	-0.2
5,584,585	+		Pf6N2E2_4831	0.12	-1.2
5,584,585	+		Pf6N2E2_4831	0.12	+0.1
5,584,585	+		Pf6N2E2_4831	0.12	+1.1
5,584,585	+		Pf6N2E2_4831	0.12	+0.1
5,584,585	+		Pf6N2E2_4831	0.12	-0.7
5,584,585	+		Pf6N2E2_4831	0.12	-0.8
5,584,586	-		Pf6N2E2_4831	0.13	-1.0
5,584,586	-		Pf6N2E2_4831	0.13	+0.1
5,584,586	-		Pf6N2E2_4831	0.13	+0.1
5,584,586	-		Pf6N2E2_4831	0.13	+1.7
5,584,586	-		Pf6N2E2_4831	0.13	+1.1
5,584,586	-		Pf6N2E2_4831	0.13	+0.7
5,584,586	-		Pf6N2E2_4831	0.13	+1.1
5,584,586	-		Pf6N2E2_4831	0.13	+0.1
5,584,586	-		Pf6N2E2_4831	0.13	+0.1
5,584,586	-		Pf6N2E2_4831	0.13	-0.2
5,584,586	-		Pf6N2E2_4831	0.13	-1.7
5,584,586	-		Pf6N2E2_4831	0.13	+0.3
5,584,596	+		Pf6N2E2_4831	0.16	+0.1
5,584,596	+		Pf6N2E2_4831	0.16	-0.9
5,584,596	+		Pf6N2E2_4831	0.16	+0.3
5,584,596	+		Pf6N2E2_4831	0.16	+1.1