Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4475

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
5,208,215	+				-5.5
5,208,215	+				+0.2
5,208,215	+				-0.4
5,208,215	+				-0.4
5,208,215	+				+0.2
5,208,215	+				+1.2
5,208,216	-				+0.2
5,208,216	-				+0.2
5,208,252	-				+1.2
5,208,253	+				+1.2
5,208,253	+				-2.0
5,208,253	+				-2.5
5,208,254	-				+1.2
5,208,254	-				+0.2
5,208,353	+				-0.7
5,208,427	+		Pf6N2E2_4474	0.25	+1.2
5,208,428	-		Pf6N2E2_4474	0.25	+0.2
5,208,428	-		Pf6N2E2_4474	0.25	+0.2
5,208,520	+		Pf6N2E2_4474	0.46	+0.2
5,208,520	+		Pf6N2E2_4474	0.46	-0.4
5,208,520	+		Pf6N2E2_4474	0.46	-0.8
5,208,520	+		Pf6N2E2_4474	0.46	-0.6
5,208,520	+		Pf6N2E2_4474	0.46	-1.2
5,208,520	+		Pf6N2E2_4474	0.46	+0.2
5,208,520	+		Pf6N2E2_4474	0.46	-1.2
5,208,520	+		Pf6N2E2_4474	0.46	-0.4
5,208,521	-		Pf6N2E2_4474	0.46	+0.2
5,208,521	-		Pf6N2E2_4474	0.46	-0.8
5,208,521	-		Pf6N2E2_4474	0.46	-0.4
5,208,521	-		Pf6N2E2_4474	0.46	+0.3
5,208,521	-		Pf6N2E2_4474	0.46	+1.2
5,208,521	-		Pf6N2E2_4474	0.46	+0.1
5,208,521	-		Pf6N2E2_4474	0.46	+0.4
5,208,616	+		Pf6N2E2_4474	0.67	+0.2
5,208,616	+		Pf6N2E2_4474	0.67	-0.8
5,208,617	-		Pf6N2E2_4474	0.67	+0.2
5,208,670	+		Pf6N2E2_4474	0.79	-0.9
5,208,670	+		Pf6N2E2_4474	0.79	-1.2
5,208,670	+		Pf6N2E2_4474	0.79	+0.2
5,208,670	+		Pf6N2E2_4474	0.79	+0.2
5,208,671	-		Pf6N2E2_4474	0.79	-0.6
5,208,671	-		Pf6N2E2_4474	0.79	+1.2
5,208,726	+				+0.2
5,208,757	+				+1.2
5,208,758	-				+1.2
5,208,771	+				+0.2
5,208,772	-				-2.0
5,208,810	-				-0.7
5,208,907	+				-0.8
5,208,937	+				+1.2
5,208,938	-				+0.2
5,208,938	-				-0.4
5,208,938	-				+0.2
5,209,153	-				+0.2
5,209,154	+				+1.2
5,209,154	+				-0.4
5,209,154	+				-0.4
5,209,154	+				+1.2
5,209,154	+				-0.4
5,209,154	+				-2.7
5,209,154	+				-0.1
5,209,154	+				+1.2
5,209,155	-				+0.2
5,209,155	-				+0.2
5,209,155	-				+0.3
5,209,155	-				-0.8
5,209,155	-				+1.2
5,209,155	-				+1.2
5,209,189	+				+0.2
5,209,189	+				-0.4
5,209,190	-				-0.4
5,209,190	-				+1.2
5,209,287	-		Pf6N2E2_4476	0.24	+1.2
5,209,304	+		Pf6N2E2_4476	0.27	-1.2
5,209,305	-		Pf6N2E2_4476	0.27	-1.1
5,209,514	+		Pf6N2E2_4476	0.62	+0.2
5,209,514	+		Pf6N2E2_4476	0.62	-1.2
5,209,515	-		Pf6N2E2_4476	0.62	+1.2
5,209,515	-		Pf6N2E2_4476	0.62	+1.2
5,209,515	-		Pf6N2E2_4476	0.62	-0.8
5,209,515	-		Pf6N2E2_4476	0.62	+1.2
5,209,515	-		Pf6N2E2_4476	0.62	+1.2
5,209,515	-		Pf6N2E2_4476	0.62	+0.6
5,209,515	-		Pf6N2E2_4476	0.62	-0.7
5,209,515	-		Pf6N2E2_4476	0.62	-0.9
5,209,515	-		Pf6N2E2_4476	0.62	+0.8
5,209,586	+		Pf6N2E2_4476	0.73	+1.2
5,209,746	+				+1.2
5,209,746	+				+0.2
5,209,746	+				+0.2
5,209,746	+				+0.2
5,209,747	-				+0.2
5,209,780	+				+0.2
5,209,781	-				-0.4
5,210,048	+				+1.2
5,210,048	+				+1.2
5,210,048	+				-1.7
5,210,049	-				+0.2
5,210,049	-				-0.8
5,210,049	-				-0.6
5,210,049	-				+1.2
5,210,051	-				-0.3
5,210,051	-				+0.2
5,210,051	-				+0.2
5,210,051	-				+0.2