Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3237

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
3,740,282	+				-0.5
3,740,283	-				+0.4
3,740,628	+				-0.5
3,740,629	-				+1.1
3,740,659	+				+0.1
3,740,666	+				-0.2
3,740,667	-				-0.5
3,740,718	+				-0.5
3,740,788	-				+0.1
3,740,961	-				-0.5
3,741,055	-		Pf6N2E2_3237	0.42	-0.5
3,741,080	+		Pf6N2E2_3237	0.53	-1.3
3,741,080	+		Pf6N2E2_3237	0.53	+1.1
3,741,096	-		Pf6N2E2_3237	0.60	+1.1
3,741,186	+				+1.1
3,741,186	+				-0.8
3,741,187	-				-0.5
3,741,187	-				-0.9
3,741,187	-				-0.9
3,741,187	-				+0.1
3,741,187	-				+0.1
3,741,187	-				+1.1
3,741,204	+				-1.3
3,741,204	+				+0.1
3,741,204	+				+0.1
3,741,204	+				+0.1
3,741,205	-				+0.1
3,741,205	-				-0.6
3,741,205	-				+0.1
3,741,205	-				-0.5
3,741,205	-				+1.1
3,741,205	-				-0.8
3,741,205	-				+1.1
3,741,205	-				+2.1
3,741,261	+				+0.1
3,741,261	+				+1.1
3,741,261	+				+0.1
3,741,262	-				-1.3
3,741,262	-				+1.1
3,741,262	-				+0.1
3,741,262	-				+0.1
3,741,262	-				+1.1
3,741,262	-				+1.1
3,741,262	-				+0.7
3,741,271	+				-0.9
3,741,272	-				+0.3
3,741,272	-				+1.1
3,741,272	-				-1.1
3,741,272	-				+0.1
3,741,272	-				-0.0
3,741,272	-				-0.9
3,741,272	-				+1.1
3,741,272	-				+1.1
3,741,400	-				+0.1
3,741,457	+				+1.1
3,741,457	+				-0.5
3,741,458	-				+1.1
3,741,518	-				+1.1
3,741,518	-				+0.1
3,741,518	-				-0.6
3,741,745	+		Pf6N2E2_3238	0.21	+1.1
3,741,745	+		Pf6N2E2_3238	0.21	+1.1
3,741,746	-		Pf6N2E2_3238	0.21	+0.1
3,741,826	+		Pf6N2E2_3238	0.29	+1.1
3,741,962	-		Pf6N2E2_3238	0.43	+0.1
3,741,962	-		Pf6N2E2_3238	0.43	+0.1
3,741,962	-		Pf6N2E2_3238	0.43	+1.1
3,741,986	+		Pf6N2E2_3238	0.45	+0.1
3,742,095	+		Pf6N2E2_3238	0.56	-1.1
3,742,120	+		Pf6N2E2_3238	0.59	-0.3
3,742,120	+		Pf6N2E2_3238	0.59	+2.1
3,742,120	+		Pf6N2E2_3238	0.59	+1.1
3,742,121	-		Pf6N2E2_3238	0.59	+0.1
3,742,177	+		Pf6N2E2_3238	0.64	+1.1
3,742,178	-		Pf6N2E2_3238	0.65	+0.1