Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3169

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
3,663,256	-		Pf6N2E2_3168	0.56	+1.1
3,663,503	-		Pf6N2E2_3168	0.74	-0.6
3,663,576	+		Pf6N2E2_3168	0.79	+1.1
3,663,714	-		Pf6N2E2_3168	0.89	+0.1
3,663,817	-				+0.1
3,663,859	-				+0.1
3,663,891	+				+0.1
3,663,892	-				+0.5
3,663,935	+				+0.1
3,663,935	+				+0.1
3,663,935	+				-2.1
3,663,935	+				+0.1
3,663,935	+				+1.1
3,663,936	-				+0.1
3,663,936	-				+0.1
3,663,936	-				+1.1
3,663,936	-				+1.1
3,663,936	-				-0.4
3,664,022	+		Pf6N2E2_3169	0.18	+1.1
3,664,163	+		Pf6N2E2_3169	0.35	+1.1
3,664,164	-		Pf6N2E2_3169	0.36	+0.1
3,664,460	-		Pf6N2E2_3169	0.72	+0.1
3,664,460	-		Pf6N2E2_3169	0.72	+1.1
3,664,463	+		Pf6N2E2_3169	0.72	+0.1
3,664,463	+		Pf6N2E2_3169	0.72	+0.1
3,664,463	+		Pf6N2E2_3169	0.72	+1.1
3,664,463	+		Pf6N2E2_3169	0.72	-0.5
3,664,463	+		Pf6N2E2_3169	0.72	+1.1
3,664,464	-		Pf6N2E2_3169	0.72	-0.5
3,664,464	-		Pf6N2E2_3169	0.72	-0.5
3,664,464	-		Pf6N2E2_3169	0.72	-0.9
3,664,464	-		Pf6N2E2_3169	0.72	-0.5
3,664,464	-		Pf6N2E2_3169	0.72	+1.1
3,664,748	-				+0.1
3,664,776	-				+1.1
3,665,184	-				+0.1
3,665,495	-		Pf6N2E2_3170	0.20	-1.3
3,665,540	+		Pf6N2E2_3170	0.23	+1.1
3,665,540	+		Pf6N2E2_3170	0.23	+1.1
3,665,541	-		Pf6N2E2_3170	0.23	-0.9
3,665,639	+		Pf6N2E2_3170	0.29	+1.1
3,665,639	+		Pf6N2E2_3170	0.29	+1.1
3,665,640	-		Pf6N2E2_3170	0.29	+0.1
3,665,678	+		Pf6N2E2_3170	0.31	+1.1