Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2663

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
3,136,030	+		Pf6N2E2_2662	0.69	-0.1
3,136,060	+		Pf6N2E2_2662	0.71	+0.9
3,136,061	-		Pf6N2E2_2662	0.71	-0.1
3,136,121	-		Pf6N2E2_2662	0.75	-1.0
3,136,175	+		Pf6N2E2_2662	0.79	+0.9
3,136,176	-		Pf6N2E2_2662	0.79	+0.3
3,136,176	-		Pf6N2E2_2662	0.79	+0.9
3,136,355	-				+0.9
3,136,355	-				+0.9
3,136,402	+				-0.1
3,136,402	+				+0.9
3,136,402	+				-0.1
3,136,402	+				-0.1
3,136,402	+				-1.3
3,136,403	-				-0.6
3,136,403	-				+0.9
3,136,403	-				+0.9
3,136,403	-				+0.9
3,136,445	-				-0.9
3,136,459	+				-0.5
3,136,460	-				+0.9
3,136,657	+				+0.9
3,136,657	+				+0.9
3,136,657	+				+0.5
3,136,657	+				-0.1
3,136,657	+				-1.6
3,136,658	-				-0.1
3,136,658	-				+0.9
3,136,658	-				-0.6
3,136,658	-				+0.9
3,136,658	-				-0.1
3,136,658	-				-1.1
3,136,779	-				-0.6
3,136,779	-				-0.1
3,136,791	+				+0.9
3,136,792	-				-0.9
3,136,876	-				-0.1
3,136,876	-				-0.1
3,136,923	+				+0.9
3,137,206	+		Pf6N2E2_2663	0.40	-0.1
3,137,275	+		Pf6N2E2_2663	0.48	-0.1
3,137,276	-		Pf6N2E2_2663	0.48	-0.3
3,137,276	-		Pf6N2E2_2663	0.48	+0.9
3,137,276	-		Pf6N2E2_2663	0.48	+0.9
3,137,276	-		Pf6N2E2_2663	0.48	+0.5
3,137,276	-		Pf6N2E2_2663	0.48	-0.1
3,137,276	-		Pf6N2E2_2663	0.48	-0.6
3,137,277	+		Pf6N2E2_2663	0.48	+0.9
3,137,277	+		Pf6N2E2_2663	0.48	-0.1
3,137,277	+		Pf6N2E2_2663	0.48	-0.6
3,137,277	+		Pf6N2E2_2663	0.48	-1.1
3,137,277	+		Pf6N2E2_2663	0.48	+0.9
3,137,277	+		Pf6N2E2_2663	0.48	-0.1
3,137,278	-		Pf6N2E2_2663	0.48	+0.9
3,137,278	-		Pf6N2E2_2663	0.48	-0.1
3,137,278	-		Pf6N2E2_2663	0.48	+0.9
3,137,278	-		Pf6N2E2_2663	0.48	+0.9
3,137,278	-		Pf6N2E2_2663	0.48	-0.4
3,137,278	-		Pf6N2E2_2663	0.48	-0.1
3,137,278	-		Pf6N2E2_2663	0.48	-0.1
3,137,278	-		Pf6N2E2_2663	0.48	+0.9
3,137,278	-		Pf6N2E2_2663	0.48	+0.3
3,137,370	+		Pf6N2E2_2663	0.59	-2.1
3,137,603	-		Pf6N2E2_2663	0.87	-0.1
3,137,603	-		Pf6N2E2_2663	0.87	-1.1
3,137,605	-		Pf6N2E2_2663	0.87	-0.4
3,137,650	-				+0.9
3,137,651	+				+0.9
3,137,652	-				-0.1
3,137,662	+				-0.1
3,137,691	+				-0.1
3,137,718	-				-1.1
3,137,909	-				+0.9
3,137,921	+				+0.9
3,137,984	+				+0.9
3,138,006	+				-0.6
3,138,015	+				+0.7
3,138,033	+				-0.1
3,138,037	+				-1.2
3,138,066	+				-1.1
3,138,237	-				-0.1
3,138,237	-				-1.4
3,138,393	+				+0.9
3,138,394	-				-0.1
3,138,394	-				+0.9
3,138,394	-				-0.6
3,138,394	-				-0.5
3,138,394	-				-0.1
3,138,434	-				-0.1
3,138,439	+				-0.1
3,138,440	-				-0.3
3,138,629	+		Pf6N2E2_2665	0.28	+0.1
3,138,629	+		Pf6N2E2_2665	0.28	-0.1
3,138,630	-		Pf6N2E2_2665	0.28	+0.9
3,138,692	+		Pf6N2E2_2665	0.37	+0.9
3,138,692	+		Pf6N2E2_2665	0.37	-1.1
3,138,692	+		Pf6N2E2_2665	0.37	+0.9
3,138,692	+		Pf6N2E2_2665	0.37	-0.6
3,138,693	-		Pf6N2E2_2665	0.37	+0.9
3,138,693	-		Pf6N2E2_2665	0.37	-0.1
3,138,693	-		Pf6N2E2_2665	0.37	-2.2
3,138,693	-		Pf6N2E2_2665	0.37	-0.6
3,138,703	+		Pf6N2E2_2665	0.38	+1.9
3,138,704	-		Pf6N2E2_2665	0.38	-1.1