Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2324

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
2,745,571	+				+1.0
2,745,572	-				+1.0
2,745,572	-				+1.0
2,745,610	-				-2.0
2,745,705	-		Pf6N2E2_2322	0.67	+1.0
2,746,095	+		Pf6N2E2_2323	0.52	+1.0
2,746,301	+		Pf6N2E2_2323	0.80	-0.0
2,746,301	+		Pf6N2E2_2323	0.80	+1.0
2,746,302	-		Pf6N2E2_2323	0.81	+1.0
2,746,302	-		Pf6N2E2_2323	0.81	+1.0
2,746,482	-				-0.9
2,746,484	-				-0.6
2,746,484	-				-0.6
2,746,605	-		Pf6N2E2_2324	0.15	-0.6
2,746,666	-		Pf6N2E2_2324	0.26	-1.6
2,746,738	-		Pf6N2E2_2324	0.40	-0.6
2,746,854	-		Pf6N2E2_2324	0.61	-1.2
2,747,067	+				-1.4
2,747,067	+				+1.0
2,747,067	+				-0.5
2,747,121	-				-1.6
2,747,180	+				+1.0
2,747,180	+				+1.0
2,747,180	+				-1.9
2,747,181	-				-0.4
2,747,181	-				-0.8
2,747,181	-				+1.0
2,747,181	-				+1.0
2,747,188	-				-0.6
2,747,194	+				-0.0
2,747,195	-				-0.6
2,747,333	-		Pf6N2E2_2325	0.23	-0.6
2,747,333	-		Pf6N2E2_2325	0.23	-0.0
2,747,333	-		Pf6N2E2_2325	0.23	-0.0
2,747,333	-		Pf6N2E2_2325	0.23	-0.7
2,747,333	-		Pf6N2E2_2325	0.23	-0.6
2,747,488	+		Pf6N2E2_2325	0.48	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	-0.0
2,747,521	+		Pf6N2E2_2325	0.53	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	+1.0
2,747,521	+		Pf6N2E2_2325	0.53	-0.6
2,747,522	-		Pf6N2E2_2325	0.53	+1.0
2,747,522	-		Pf6N2E2_2325	0.53	-0.5
2,747,635	-		Pf6N2E2_2325	0.71	+1.0
2,747,737	-		Pf6N2E2_2325	0.88	-1.0
2,747,737	-		Pf6N2E2_2325	0.88	+1.0
2,747,737	-		Pf6N2E2_2325	0.88	+1.0
2,747,813	+				+1.0
2,747,813	+				+1.0
2,747,813	+				+1.0
2,747,813	+				-0.5
2,747,814	-				+1.0
2,747,814	-				-0.0
2,747,832	-				-0.0
2,747,832	-				-0.0
2,747,834	-				+0.3
2,747,860	-				-0.2
2,748,035	-		Pf6N2E2_2326	0.17	-0.0
2,748,051	-		Pf6N2E2_2326	0.18	-0.5