Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2162

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
2,565,346	-		Pf6N2E2_2161	0.61	+1.3
2,565,346	-		Pf6N2E2_2161	0.61	+0.9
2,565,500	+		Pf6N2E2_2161	0.86	+0.9
2,565,501	-		Pf6N2E2_2161	0.86	-0.7
2,565,710	-				+0.9
2,565,710	-				-0.1
2,565,719	-				+0.9
2,565,724	+				+0.9
2,565,725	-				-0.5
2,565,725	-				+0.9
2,565,741	-				-0.7
2,565,747	-				-0.7
2,565,779	-				-1.4
2,565,779	-				+0.9
2,565,815	-				+0.9
2,565,815	-				+0.9
2,565,815	-				+0.9
2,565,891	-				+0.9
2,566,095	+				-0.7
2,566,110	+				+0.9
2,566,120	-				+0.9
2,566,270	+		Pf6N2E2_2162	0.12	-2.3
2,566,270	+		Pf6N2E2_2162	0.12	-0.7
2,566,628	+		Pf6N2E2_2162	0.66	+0.9
2,566,628	+		Pf6N2E2_2162	0.66	+0.9
2,566,629	-		Pf6N2E2_2162	0.66	-1.7
2,566,629	-		Pf6N2E2_2162	0.66	-0.1
2,566,629	-		Pf6N2E2_2162	0.66	+0.9
2,566,629	-		Pf6N2E2_2162	0.66	-0.7
2,566,629	-		Pf6N2E2_2162	0.66	-0.1
2,566,853	+				+0.9
2,566,870	+				+0.9
2,566,871	-				-0.1
2,566,874	+				+1.2
2,566,875	-				+0.9
2,566,875	-				+0.9
2,566,875	-				+0.9
2,566,912	+				+0.9
2,566,920	+				+0.9
2,566,920	+				-0.7
2,566,992	+				+0.9
2,567,074	-				-0.1
2,567,198	+				+0.9
2,567,313	+		Pf6N2E2_2163	0.15	+0.3
2,567,425	+		Pf6N2E2_2163	0.23	+0.9
2,567,425	+		Pf6N2E2_2163	0.23	+0.9
2,567,425	+		Pf6N2E2_2163	0.23	+0.9
2,567,425	+		Pf6N2E2_2163	0.23	+0.9
2,567,425	+		Pf6N2E2_2163	0.23	-0.1
2,567,426	-		Pf6N2E2_2163	0.23	+0.9
2,567,426	-		Pf6N2E2_2163	0.23	-0.1
2,567,427	+		Pf6N2E2_2163	0.23	+0.5
2,567,427	+		Pf6N2E2_2163	0.23	+0.9
2,567,427	+		Pf6N2E2_2163	0.23	+0.9
2,567,427	+		Pf6N2E2_2163	0.23	+0.9
2,567,427	+		Pf6N2E2_2163	0.23	-0.2
2,567,427	+		Pf6N2E2_2163	0.23	+0.4
2,567,428	-		Pf6N2E2_2163	0.23	+0.9
2,567,428	-		Pf6N2E2_2163	0.23	+0.9
2,567,428	-		Pf6N2E2_2163	0.23	+0.9
2,567,459	-		Pf6N2E2_2163	0.25	+0.5
2,567,654	-		Pf6N2E2_2163	0.39	-0.1
2,567,738	+		Pf6N2E2_2163	0.45	+0.9
2,567,738	+		Pf6N2E2_2163	0.45	-0.5
2,567,738	+		Pf6N2E2_2163	0.45	-0.4
2,567,738	+		Pf6N2E2_2163	0.45	+0.9
2,567,738	+		Pf6N2E2_2163	0.45	+0.9
2,567,739	-		Pf6N2E2_2163	0.45	-0.1
2,567,739	-		Pf6N2E2_2163	0.45	-1.6
2,567,739	-		Pf6N2E2_2163	0.45	-1.0
2,567,765	+		Pf6N2E2_2163	0.47	-0.1
2,567,765	+		Pf6N2E2_2163	0.47	+0.9
2,567,765	+		Pf6N2E2_2163	0.47	+0.9
2,567,766	-		Pf6N2E2_2163	0.47	+0.9
2,567,766	-		Pf6N2E2_2163	0.47	+0.9
2,567,766	-		Pf6N2E2_2163	0.47	+0.9
2,567,766	-		Pf6N2E2_2163	0.47	+0.9
2,567,766	-		Pf6N2E2_2163	0.47	-1.3
2,567,766	-		Pf6N2E2_2163	0.47	+0.9
2,567,849	+		Pf6N2E2_2163	0.53	-0.1
2,567,849	+		Pf6N2E2_2163	0.53	-0.1
2,567,850	-		Pf6N2E2_2163	0.53	+0.9