Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1832

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
2,169,387	+				+0.9
2,169,387	+				+0.9
2,169,387	+				-1.0
2,169,387	+				-1.4
2,169,388	-				-0.1
2,169,388	-				-1.2
2,169,410	+				+0.9
2,169,411	-				-0.7
2,169,411	-				+0.9
2,169,888	+		Pf6N2E2_1831	0.54	+0.9
2,169,904	-		Pf6N2E2_1831	0.55	+0.9
2,169,904	-		Pf6N2E2_1831	0.55	+0.9
2,170,088	+		Pf6N2E2_1831	0.76	+0.9
2,170,088	+		Pf6N2E2_1831	0.76	+0.9
2,170,088	+		Pf6N2E2_1831	0.76	-0.1
2,170,104	+		Pf6N2E2_1831	0.78	-0.7
2,170,104	+		Pf6N2E2_1831	0.78	-0.1
2,170,105	-		Pf6N2E2_1831	0.78	+0.9
2,170,105	-		Pf6N2E2_1831	0.78	-0.7
2,170,253	+				+0.9
2,170,406	+		Pf6N2E2_1832	0.12	-0.1
2,170,407	-		Pf6N2E2_1832	0.12	+0.9
2,170,407	-		Pf6N2E2_1832	0.12	+0.9
2,170,407	-		Pf6N2E2_1832	0.12	+1.1
2,170,463	+		Pf6N2E2_1832	0.19	+0.9
2,170,500	-		Pf6N2E2_1832	0.23	-0.7
2,170,572	+		Pf6N2E2_1832	0.32	-0.1
2,170,649	-		Pf6N2E2_1832	0.41	+0.9
2,170,903	+		Pf6N2E2_1832	0.70	+2.6
2,170,903	+		Pf6N2E2_1832	0.70	+0.9
2,170,903	+		Pf6N2E2_1832	0.70	+0.9
2,170,903	+		Pf6N2E2_1832	0.70	+0.9
2,170,903	+		Pf6N2E2_1832	0.70	-0.1
2,170,903	+		Pf6N2E2_1832	0.70	+0.9
2,170,903	+		Pf6N2E2_1832	0.70	-0.7
2,170,904	-		Pf6N2E2_1832	0.70	+0.9
2,170,904	-		Pf6N2E2_1832	0.70	+0.4
2,170,996	-		Pf6N2E2_1832	0.81	+0.9
2,171,036	-		Pf6N2E2_1832	0.86	-0.1
2,171,036	-		Pf6N2E2_1832	0.86	-0.7
2,171,136	+				+0.9
2,171,136	+				-0.1
2,171,136	+				-0.7
2,171,137	-				-0.1
2,171,181	+				+0.9
2,171,655	+		Pf6N2E2_1833	0.33	+0.9
2,171,655	+		Pf6N2E2_1833	0.33	-0.1
2,171,657	+		Pf6N2E2_1833	0.33	+0.9
2,171,926	+		Pf6N2E2_1833	0.51	+0.9
2,171,926	+		Pf6N2E2_1833	0.51	-1.1
2,172,079	+		Pf6N2E2_1833	0.61	+0.9
2,172,081	+		Pf6N2E2_1833	0.61	-0.7
2,172,156	+		Pf6N2E2_1833	0.66	+0.6
2,172,156	+		Pf6N2E2_1833	0.66	+0.9