Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1746

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
2,058,828	-		Pf6N2E2_1745	0.18	+0.9
2,059,048	-		Pf6N2E2_1745	0.37	-0.1
2,059,119	+		Pf6N2E2_1745	0.43	+0.9
2,059,150	+		Pf6N2E2_1745	0.46	+0.9
2,059,151	-		Pf6N2E2_1745	0.46	+0.9
2,059,151	-		Pf6N2E2_1745	0.46	+0.9
2,059,399	-		Pf6N2E2_1745	0.67	+0.9
2,059,447	-		Pf6N2E2_1745	0.71	-0.4
2,059,447	-		Pf6N2E2_1745	0.71	+0.9
2,059,533	+		Pf6N2E2_1745	0.78	+0.9
2,059,534	-		Pf6N2E2_1745	0.78	+0.9
2,059,600	-		Pf6N2E2_1745	0.84	+0.9
2,059,603	-		Pf6N2E2_1745	0.84	-0.7
2,059,665	+		Pf6N2E2_1745	0.89	-1.3
2,059,666	-		Pf6N2E2_1745	0.89	-0.8
2,059,740	+				-0.1
2,059,740	+				+2.5
2,059,740	+				+0.9
2,059,791	+				+0.9
2,059,873	+				+0.9
2,059,873	+				-0.1
2,059,907	+		Pf6N2E2_1746	0.12	+0.9
2,059,907	+		Pf6N2E2_1746	0.12	-0.1
2,059,969	-		Pf6N2E2_1746	0.20	+0.9
2,060,116	+		Pf6N2E2_1746	0.38	+0.9
2,060,117	-		Pf6N2E2_1746	0.38	-0.7
2,060,175	+		Pf6N2E2_1746	0.45	-0.1
2,060,175	+		Pf6N2E2_1746	0.45	-0.7
2,060,175	+		Pf6N2E2_1746	0.45	-1.4
2,060,176	-		Pf6N2E2_1746	0.45	-0.8
2,060,701	+				-0.6
2,060,701	+				+0.9
2,060,701	+				-0.1
2,060,702	-				-0.7
2,060,778	-		Pf6N2E2_1747	0.11	-0.1
2,060,856	-		Pf6N2E2_1747	0.21	+0.9
2,061,010	-		Pf6N2E2_1747	0.42	+0.9
2,061,127	+		Pf6N2E2_1747	0.58	-0.1
2,061,270	-		Pf6N2E2_1747	0.78	+0.1
2,061,364	+				-0.7
2,061,365	-				-0.9