Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_994

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,162,563	+		Pf6N2E2_993	0.58	+0.3
1,162,563	+		Pf6N2E2_993	0.58	+0.8
1,162,567	-		Pf6N2E2_993	0.58	+0.8
1,162,615	+		Pf6N2E2_993	0.61	-0.2
1,162,750	+		Pf6N2E2_993	0.70	+0.8
1,162,751	-		Pf6N2E2_993	0.70	+0.8
1,162,866	-		Pf6N2E2_993	0.78	+0.8
1,162,956	+		Pf6N2E2_993	0.84	+0.8
1,162,956	+				-0.2
1,163,064	+				+0.8
1,163,124	+				-2.2
1,163,142	+				+0.8
1,163,151	-				+0.8
1,163,158	-				+1.8
1,163,232	+				+0.8
1,163,232	+				+0.3
1,163,255	+				-1.2
1,163,328	+				-0.2
1,163,351	+				+0.8
1,163,464	+				+0.8
1,163,575	-				+0.8
1,163,629	-		Pf6N2E2_994	0.11	-1.2
1,163,694	-		Pf6N2E2_994	0.17	-0.2
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,792	+		Pf6N2E2_994	0.26	-0.2
1,163,792	+		Pf6N2E2_994	0.26	+0.8
1,163,793	-		Pf6N2E2_994	0.26	+0.8
1,163,837	+		Pf6N2E2_994	0.30	+0.8
1,163,837	+		Pf6N2E2_994	0.30	+0.8
1,163,916	-		Pf6N2E2_994	0.38	+0.8
1,163,955	+		Pf6N2E2_994	0.41	+0.8
1,163,956	-		Pf6N2E2_994	0.41	+1.4
1,164,007	-		Pf6N2E2_994	0.46	-1.5
1,164,049	+		Pf6N2E2_994	0.50	+0.8
1,164,049	+		Pf6N2E2_994	0.50	-0.2
1,164,049	+		Pf6N2E2_994	0.50	+0.8
1,164,053	+		Pf6N2E2_994	0.50	-0.2
1,164,054	-		Pf6N2E2_994	0.50	-0.2
1,164,054	-		Pf6N2E2_994	0.50	+0.6
1,164,054	-		Pf6N2E2_994	0.50	+0.8
1,164,142	+		Pf6N2E2_994	0.58	+0.8
1,164,142	+		Pf6N2E2_994	0.58	-0.2
1,164,142	+		Pf6N2E2_994	0.58	-0.2
1,164,312	+		Pf6N2E2_994	0.74	-1.5
1,164,313	-		Pf6N2E2_994	0.74	-0.2
1,164,354	-		Pf6N2E2_994	0.78	-0.2
1,164,382	+		Pf6N2E2_994	0.80	-1.7
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,382	+		Pf6N2E2_994	0.80	-0.4
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,383	-		Pf6N2E2_994	0.81	+0.8
1,164,383	-		Pf6N2E2_994	0.81	-0.2
1,164,383	-		Pf6N2E2_994	0.81	-1.0
1,164,383	-		Pf6N2E2_994	0.81	-0.7
1,164,487	+				+0.8
1,164,487	+				+0.8
1,164,514	+				+0.8
1,164,588	+				+0.8
1,164,623	-				+0.8
1,164,698	+				-0.2
1,164,698	+				+0.8
1,164,698	+				-0.2
1,164,698	+				-0.7
1,164,699	-				+0.8
1,164,699	-				+0.4
1,164,699	-				+1.8
1,164,780	-		Pf6N2E2_995	0.11	-0.2
1,164,780	-		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	-0.4
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	-0.2
1,164,782	+		Pf6N2E2_995	0.11	-0.2
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	-0.2
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	-0.7
1,164,817	+		Pf6N2E2_995	0.15	-0.4
1,164,834	-		Pf6N2E2_995	0.17	-1.3
1,164,935	-		Pf6N2E2_995	0.30	-0.2
1,165,018	+		Pf6N2E2_995	0.40	+0.8
1,165,018	+		Pf6N2E2_995	0.40	-0.2
1,165,019	-		Pf6N2E2_995	0.40	-0.2
1,165,019	-		Pf6N2E2_995	0.40	+0.8
1,165,029	+		Pf6N2E2_995	0.42	-1.5
1,165,030	-		Pf6N2E2_995	0.42	-0.2
1,165,030	-				+1.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	-0.2
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,220	+		Pf6N2E2_995	0.65	+0.8
1,165,220	+		Pf6N2E2_995	0.65	-0.7
1,165,220	+		Pf6N2E2_995	0.65	+0.8
1,165,255	-		Pf6N2E2_995	0.70	-0.7
1,165,255	-		Pf6N2E2_995	0.70	+0.8
1,165,444	+				-0.2
1,165,445	-				+0.8
1,165,498	+				+0.8
1,165,498	+				+0.8