Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_69

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
109,084	-		Pf6N2E2_68	0.62	+0.9
109,084	-		Pf6N2E2_68	0.62	-0.1
109,195	-		Pf6N2E2_68	0.73	+0.5
109,333	+		Pf6N2E2_68	0.87	+0.9
109,333	+		Pf6N2E2_68	0.87	+0.9
109,334	-		Pf6N2E2_68	0.87	-0.1
109,334	-		Pf6N2E2_68	0.87	+0.9
109,334	-		Pf6N2E2_68	0.87	+0.4
109,376	+				-0.7
109,376	+				-1.1
109,376	+				+0.9
109,376	+				+0.9
109,376	+				+0.9
109,377	-				-0.1
109,377	-				-1.4
109,377	-				-0.1
109,380	+				-0.1
109,380	+				-0.7
109,380	+				-0.3
109,381	-				-0.7
109,381	-				-0.4
109,381	-				+0.5
109,381	-				-0.4
109,398	+				-0.1
109,451	+				+0.9
109,465	+				+0.9
109,472	+				-0.6
109,472	+				+0.9
109,500	+				+0.9
109,511	+				+0.9
109,511	+				-0.1
109,529	+				+0.9
109,530	-				+0.9
109,618	-				-0.1
109,634	+				+0.9
109,634	+				+0.9
109,634	+				-1.4
109,634	+				+0.9
109,678	-				-0.1
109,703	+				+0.9
109,703	+				-0.1
109,704	-				+0.9
109,704	-				-2.2
109,709	+				+0.9
109,710	-				-0.1
110,051	-		Pf6N2E2_69	0.14	-0.1
110,057	+		Pf6N2E2_69	0.15	-0.1
110,057	+		Pf6N2E2_69	0.15	-0.1
110,057	+		Pf6N2E2_69	0.15	-0.1
110,058	-		Pf6N2E2_69	0.15	-0.5
110,058	-		Pf6N2E2_69	0.15	-0.0
110,058	-		Pf6N2E2_69	0.15	+0.9
110,164	+		Pf6N2E2_69	0.19	+0.9
110,164	+		Pf6N2E2_69	0.19	+0.3
110,165	-		Pf6N2E2_69	0.19	-0.0
110,165	-		Pf6N2E2_69	0.19	+0.9
110,165	-		Pf6N2E2_69	0.19	+0.9
110,905	+		Pf6N2E2_69	0.47	-0.2
110,905	+		Pf6N2E2_69	0.47	+0.5
110,905	+		Pf6N2E2_69	0.47	+0.9
111,382	+		Pf6N2E2_69	0.66	-0.1
111,383	-				+0.9
111,553	+		Pf6N2E2_69	0.72	-1.1
111,553	+		Pf6N2E2_69	0.72	+0.9
111,554	-		Pf6N2E2_69	0.72	-0.2
111,554	-		Pf6N2E2_69	0.72	-1.4
111,554	-		Pf6N2E2_69	0.72	+0.4
112,159	+				-1.7
112,159	+				-0.1
112,159	+				-0.1
112,159	+				+0.0
112,159	+				-0.1
112,159	+				-1.3
112,159	+				-0.5
112,160	-				+0.0
112,160	-				-0.7
112,282	+				-0.7
112,284	+				-0.5
112,284	+				+0.9
112,284	+				-0.6
112,284	+				+0.3
112,284	+				-0.8
112,284	+				+0.9
112,285	-				-0.1
112,285	-				+0.9
112,285	-				-0.4
112,569	+				-0.7
112,569	+				-0.1
112,569	+				+0.3
112,570	-				-0.6
112,570	-				+0.5
112,571	+				-0.7
112,571	+				+1.3
112,571	+				-0.1
112,571	+				+0.9
112,571	+				-0.9
112,571	+				-0.3
112,571	+				-0.3
112,572	-				-0.1
112,572	-				+2.1
112,572	-				-1.5
112,572	-				-1.3
112,589	-				+0.9
112,589	-				-1.2
112,603	+				+0.2
112,620	+				-0.7
112,620	+				+0.9
112,621	-				-0.7
112,682	+				+0.9
112,683	-				-0.1
112,991	+		Pf6N2E2_70	0.45	+0.9
112,992	-		Pf6N2E2_70	0.45	+0.9
112,992	-		Pf6N2E2_70	0.45	+0.3
113,000	+		Pf6N2E2_70	0.46	-0.4
113,000	+		Pf6N2E2_70	0.46	-1.7
113,001	-		Pf6N2E2_70	0.46	-0.1