Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_638

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
729,531	-		Pf6N2E2_637	0.47	-0.2
729,825	-		Pf6N2E2_637	0.68	+0.4
729,825	-		Pf6N2E2_637	0.68	+0.8
730,061	+		Pf6N2E2_637	0.84	+0.8
730,061	+		Pf6N2E2_637	0.84	-0.2
730,061	+		Pf6N2E2_637	0.84	+0.1
730,062	-		Pf6N2E2_637	0.84	-0.2
730,062	-		Pf6N2E2_637	0.84	+0.8
730,101	-		Pf6N2E2_637	0.87	+0.8
730,101	-		Pf6N2E2_637	0.87	-0.2
730,115	+		Pf6N2E2_637	0.88	-0.8
730,116	-		Pf6N2E2_637	0.88	+0.8
730,232	+				+0.8
730,233	-				+0.8
730,233	-				+0.8
730,233	-				-0.3
730,358	+				-1.5
730,359	-				-0.2
730,426	+				-0.2
730,498	+				+0.8
730,498	+				-0.2
730,501	+				+0.1
730,501	+				+0.8
730,502	-				+0.8
730,502	-				+0.8
730,502	-				+0.3
730,502	-				-0.2
730,502	-				+0.8
730,801	+		Pf6N2E2_638	0.73	-0.2
730,801	+		Pf6N2E2_638	0.73	-0.2
730,802	-		Pf6N2E2_638	0.73	-1.0
730,802	-		Pf6N2E2_638	0.73	+0.8
731,029	-				-0.8
731,103	-				-0.5
731,169	+		Pf6N2E2_639	0.20	+0.8
731,170	-		Pf6N2E2_639	0.20	-0.5
731,170	-		Pf6N2E2_639	0.20	+0.8
731,170	-		Pf6N2E2_639	0.20	+0.8
731,170	-		Pf6N2E2_639	0.20	-0.8
731,495	+				+0.8
731,528	+				+0.8
731,528	+				+0.8
731,529	-				+0.8
731,540	-				-0.2
731,540	-				+0.8
731,572	+				-0.3
731,573	-				-0.8
731,573	-				-0.6
731,803	+		Pf6N2E2_640	0.24	-0.2
731,803	+		Pf6N2E2_640	0.24	+0.8
731,804	-		Pf6N2E2_640	0.25	+0.4
731,882	+		Pf6N2E2_640	0.37	+0.8