Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5916

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,734,196	+		Pf6N2E2_5915	0.61	-0.1
6,734,197	-		Pf6N2E2_5915	0.61	-0.7
6,734,197	-		Pf6N2E2_5915	0.61	+0.2
6,734,197	-		Pf6N2E2_5915	0.61	-0.1
6,734,267	-		Pf6N2E2_5915	0.66	+0.9
6,734,403	+		Pf6N2E2_5915	0.76	+0.9
6,734,403	+		Pf6N2E2_5915	0.76	+0.9
6,734,403	+		Pf6N2E2_5915	0.76	-0.1
6,734,403	+		Pf6N2E2_5915	0.76	+0.9
6,734,404	-		Pf6N2E2_5915	0.76	+0.9
6,734,404	-		Pf6N2E2_5915	0.76	+0.0
6,734,807	+				-0.7
6,734,808	-				-0.1
6,734,871	+		Pf6N2E2_5916	0.12	+0.9
6,734,872	-		Pf6N2E2_5916	0.12	-0.1
6,734,944	+		Pf6N2E2_5916	0.20	+0.9
6,734,944	+		Pf6N2E2_5916	0.20	-1.3
6,734,944	+		Pf6N2E2_5916	0.20	+0.1
6,734,945	-		Pf6N2E2_5916	0.20	+0.9
6,735,037	+		Pf6N2E2_5916	0.29	-0.9
6,735,098	+		Pf6N2E2_5916	0.35	-0.8
6,735,098	+		Pf6N2E2_5916	0.35	-0.1
6,735,099	-		Pf6N2E2_5916	0.35	-1.4
6,735,352	+		Pf6N2E2_5916	0.61	-0.7
6,735,352	+		Pf6N2E2_5916	0.61	+0.9
6,735,352	+		Pf6N2E2_5916	0.61	-0.7
6,735,353	-		Pf6N2E2_5916	0.61	-0.8
6,735,622	+		Pf6N2E2_5916	0.88	-0.1
6,735,622	+		Pf6N2E2_5916	0.88	-0.7
6,735,623	-		Pf6N2E2_5916	0.89	-0.1
6,735,623	-		Pf6N2E2_5916	0.89	-0.2
6,735,623	-		Pf6N2E2_5916	0.89	-0.1
6,735,623	-		Pf6N2E2_5916	0.89	-0.7
6,735,623	-		Pf6N2E2_5916	0.89	-0.1
6,735,878	+		Pf6N2E2_5917	0.12	+0.9
6,735,879	-		Pf6N2E2_5917	0.12	+0.9
6,736,096	+		Pf6N2E2_5917	0.34	-1.3
6,736,097	-		Pf6N2E2_5917	0.35	-0.5
6,736,237	+				+0.9
6,736,237	+		Pf6N2E2_5917	0.49	-0.6
6,736,238	-		Pf6N2E2_5917	0.49	+0.9
6,736,238	-		Pf6N2E2_5917	0.49	+0.5
6,736,238	-		Pf6N2E2_5917	0.49	-0.9
6,736,533	+		Pf6N2E2_5917	0.80	-0.1
6,736,561	+		Pf6N2E2_5917	0.83	-0.6
6,736,722	+				+0.9
6,736,722	+				-0.3
6,736,722	+				+0.9
6,736,723	-				+0.9
6,736,723	-				+0.9
6,736,723	-				-1.6
6,736,726	+				-0.1
6,736,726	+				-0.9
6,736,726	+				+0.0
6,736,726	+				-0.6
6,736,726	+				+0.9
6,736,726	+				-0.1
6,736,727	-				+0.9
6,736,727	-				+0.9
6,736,727	-				+0.9
6,736,727	-				-0.1
6,736,727	-				+0.9
6,736,727	-				+0.9