Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5839

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,655,491	+				-0.3
6,655,491	+				-1.4
6,655,492	-				+0.9
6,655,551	+		Pf6N2E2_5838	0.15	+0.9
6,655,552	-		Pf6N2E2_5838	0.16	-0.1
6,655,552	-		Pf6N2E2_5838	0.16	+0.9
6,655,674	+		Pf6N2E2_5838	0.31	-0.6
6,655,674	+		Pf6N2E2_5838	0.31	-0.1
6,655,674	+		Pf6N2E2_5838	0.31	+0.6
6,655,675	-		Pf6N2E2_5838	0.31	-0.1
6,655,675	-		Pf6N2E2_5838	0.31	+0.9
6,655,675	-		Pf6N2E2_5838	0.31	-0.6
6,655,683	+		Pf6N2E2_5838	0.32	+0.9
6,655,684	-		Pf6N2E2_5838	0.32	+0.9
6,655,752	+		Pf6N2E2_5838	0.41	-0.1
6,655,752	+		Pf6N2E2_5838	0.41	-2.4
6,655,752	+		Pf6N2E2_5838	0.41	-0.1
6,655,753	-		Pf6N2E2_5838	0.41	+0.9
6,655,830	+		Pf6N2E2_5838	0.51	+0.9
6,655,830	+		Pf6N2E2_5838	0.51	-0.6
6,655,830	+		Pf6N2E2_5838	0.51	-0.1
6,656,094	+		Pf6N2E2_5838	0.85	-0.5
6,656,094	+		Pf6N2E2_5838	0.85	+0.9
6,656,094	+		Pf6N2E2_5838	0.85	+0.9
6,656,094	+		Pf6N2E2_5838	0.85	-0.1
6,656,094	+		Pf6N2E2_5838	0.85	+0.9
6,656,095	-		Pf6N2E2_5838	0.85	+0.9
6,656,095	-		Pf6N2E2_5838	0.85	+0.9
6,656,112	+		Pf6N2E2_5838	0.87	-0.1
6,656,112	+		Pf6N2E2_5838	0.87	-0.6
6,656,113	-		Pf6N2E2_5838	0.87	+0.9
6,656,113	-		Pf6N2E2_5838	0.87	-0.1
6,656,223	+				+0.9
6,656,223	+				+0.9
6,656,223	+				-0.1
6,656,223	+				-0.7
6,656,224	-				-0.1
6,656,224	-				+1.3
6,656,224	-				-0.6
6,656,224	-				-0.1
6,656,233	+				-0.1
6,656,233	+				-0.6
6,656,234	-				-0.6
6,656,234	-				+0.9
6,656,234	-				+0.9
6,656,359	+				-0.6
6,656,359	+				+0.9
6,656,380	+				+0.9
6,656,380	+				-0.8
6,656,380	+				+0.9
6,656,384	-				+0.9
6,656,480	+				-0.1
6,656,498	+				+0.9
6,656,689	+		Pf6N2E2_5839	0.17	-0.1
6,656,690	-		Pf6N2E2_5839	0.17	-0.4
6,656,734	+		Pf6N2E2_5839	0.20	+0.9
6,656,735	-		Pf6N2E2_5839	0.20	+0.9
6,656,761	+		Pf6N2E2_5839	0.21	-0.6
6,656,761	+		Pf6N2E2_5839	0.21	-0.6
6,656,761	+		Pf6N2E2_5839	0.21	-0.1
6,656,762	-		Pf6N2E2_5839	0.22	-0.1
6,656,762	-		Pf6N2E2_5839	0.22	+0.1
6,656,762	-		Pf6N2E2_5839	0.22	-1.4
6,656,818	+		Pf6N2E2_5839	0.25	-0.6
6,656,938	+		Pf6N2E2_5839	0.31	-0.1
6,656,939	-		Pf6N2E2_5839	0.32	+0.1
6,656,992	+		Pf6N2E2_5839	0.35	-1.4
6,656,993	-		Pf6N2E2_5839	0.35	+0.9
6,656,993	-		Pf6N2E2_5839	0.35	+0.0
6,656,993	-		Pf6N2E2_5839	0.35	+0.9
6,657,013	-		Pf6N2E2_5839	0.36	-1.5
6,657,031	+		Pf6N2E2_5839	0.37	-1.1
6,657,032	-		Pf6N2E2_5839	0.37	-0.5
6,657,032	-		Pf6N2E2_5839	0.37	-0.1
6,657,283	+		Pf6N2E2_5839	0.51	-0.5
6,657,283	+		Pf6N2E2_5839	0.51	-0.1
6,657,284	-		Pf6N2E2_5839	0.51	+0.9
6,657,284	-		Pf6N2E2_5839	0.51	-0.4
6,657,736	+		Pf6N2E2_5839	0.77	+0.9
6,657,737	-		Pf6N2E2_5839	0.77	+0.9
6,657,737	-		Pf6N2E2_5839	0.77	-0.6
6,657,737	-				+0.9
6,657,895	+		Pf6N2E2_5839	0.86	+0.9
6,657,895	+		Pf6N2E2_5839	0.86	-0.1
6,657,896	-		Pf6N2E2_5839	0.86	-0.1
6,658,057	+				-1.9
6,658,211	+		Pf6N2E2_5840	0.28	+0.9
6,658,211	+		Pf6N2E2_5840	0.28	-0.4
6,658,211	+		Pf6N2E2_5840	0.28	-0.1
6,658,301	+		Pf6N2E2_5840	0.78	+0.9
6,658,301	+		Pf6N2E2_5840	0.78	+0.9
6,658,302	-		Pf6N2E2_5840	0.78	-0.1
6,658,435	+				-0.1
6,658,435	+				+0.9
6,658,436	-				+0.9
6,658,729	+		Pf6N2E2_5841	0.84	+0.9
6,658,926	+				+0.9
6,658,926	+				-0.1
6,658,926	+				+0.9
6,658,926	+				+0.9
6,658,926	+				-0.1
6,658,926	+				-0.7
6,658,926	+				-0.1
6,658,927	-				+0.9
6,658,927	-				+0.2
6,658,927	-				-0.6
6,659,050	+		Pf6N2E2_5842	0.23	+0.9
6,659,113	+		Pf6N2E2_5842	0.49	+0.9
6,659,113	+		Pf6N2E2_5842	0.49	+0.9
6,659,114	-		Pf6N2E2_5842	0.49	+0.9
6,659,114	-		Pf6N2E2_5842	0.49	+0.9
6,659,114	-		Pf6N2E2_5842	0.49	+0.9
6,659,114	-		Pf6N2E2_5842	0.49	-0.1
6,659,114	-		Pf6N2E2_5842	0.49	+0.9