Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5611

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,425,379	-		Pf6N2E2_5610	0.35	+1.0
6,425,491	+		Pf6N2E2_5610	0.43	-0.3
6,425,581	-		Pf6N2E2_5610	0.50	+1.0
6,425,896	+		Pf6N2E2_5610	0.75	-0.7
6,425,897	-		Pf6N2E2_5610	0.75	-1.0
6,425,897	-		Pf6N2E2_5610	0.75	+1.0
6,425,898	+		Pf6N2E2_5610	0.75	+1.0
6,425,933	+		Pf6N2E2_5610	0.78	+0.0
6,425,953	+		Pf6N2E2_5610	0.80	+1.0
6,425,953	+		Pf6N2E2_5610	0.80	+1.0
6,425,954	-		Pf6N2E2_5610	0.80	+0.0
6,426,160	-				+1.0
6,426,160	-				+1.0
6,426,160	-				+1.0
6,426,211	+				+1.0
6,426,236	+				-1.0
6,426,263	-				-0.4
6,426,293	+				+1.0
6,426,293	+				+0.0
6,426,294	-				-0.4
6,426,294	-				+1.0
6,426,327	-				+0.0
6,426,396	+		Pf6N2E2_5611	0.10	-0.3
6,426,633	-		Pf6N2E2_5611	0.46	-0.2
6,426,863	-		Pf6N2E2_5611	0.80	+1.0
6,426,891	+		Pf6N2E2_5611	0.84	+1.0
6,426,891	+		Pf6N2E2_5611	0.84	+1.0
6,426,891	+		Pf6N2E2_5611	0.84	+1.0
6,426,891	+		Pf6N2E2_5611	0.84	+1.0
6,426,891	+		Pf6N2E2_5611	0.84	-0.4
6,426,891	+		Pf6N2E2_5611	0.84	+0.2
6,426,892	-		Pf6N2E2_5611	0.84	+0.5
6,426,892	-		Pf6N2E2_5611	0.84	+0.0
6,426,892	-		Pf6N2E2_5611	0.84	+1.0
6,426,892	-		Pf6N2E2_5611	0.84	+1.0
6,426,892	-		Pf6N2E2_5611	0.84	+1.0
6,426,895	+		Pf6N2E2_5611	0.85	-0.4
6,426,896	+		Pf6N2E2_5611	0.85	+1.0
6,426,896	+		Pf6N2E2_5611	0.85	-0.0
6,426,896	+		Pf6N2E2_5611	0.85	+1.0
6,426,896	+		Pf6N2E2_5611	0.85	+0.9
6,426,897	-		Pf6N2E2_5611	0.85	+1.0
6,426,897	-		Pf6N2E2_5611	0.85	+1.0
6,426,897	-		Pf6N2E2_5611	0.85	+1.0
6,426,959	-				+0.0
6,426,959	-				-0.3
6,426,976	+				+1.0
6,426,976	+				-1.0
6,426,976	+				+1.0
6,426,976	+				-0.4
6,426,976	+				+1.0
6,426,976	+				+0.0
6,426,976	+				+0.0
6,426,976	+				+1.0
6,426,976	+				+0.0
6,426,977	-				-0.8
6,426,977	-				+1.0
6,426,977	-				-0.5
6,426,980	+				-2.0
6,426,980	+				-0.6
6,426,980	+				+0.0
6,426,995	-				+1.0
6,427,008	+				-0.5
6,427,008	+				-1.4
6,427,090	+		Pf6N2E2_5612	0.13	+1.0
6,427,090	+		Pf6N2E2_5612	0.13	-1.3
6,427,090	+		Pf6N2E2_5612	0.13	+0.7
6,427,090	+		Pf6N2E2_5612	0.13	-0.5
6,427,090	+		Pf6N2E2_5612	0.13	+1.0
6,427,090	+		Pf6N2E2_5612	0.13	+1.0
6,427,090	+		Pf6N2E2_5612	0.13	-0.7
6,427,090	+		Pf6N2E2_5612	0.13	+1.0
6,427,090	+		Pf6N2E2_5612	0.13	-0.5
6,427,090	+		Pf6N2E2_5612	0.13	+0.0
6,427,091	-		Pf6N2E2_5612	0.13	+0.0
6,427,096	-		Pf6N2E2_5612	0.13	-1.3
6,427,154	+		Pf6N2E2_5612	0.22	-0.5
6,427,154	+		Pf6N2E2_5612	0.22	+1.0
6,427,155	-		Pf6N2E2_5612	0.22	+1.4
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	-0.1
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	-1.3
6,427,177	+		Pf6N2E2_5612	0.25	-0.4
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	-0.5
6,427,177	+		Pf6N2E2_5612	0.25	+0.0
6,427,178	-		Pf6N2E2_5612	0.25	+1.0
6,427,178	-		Pf6N2E2_5612	0.25	+1.0
6,427,181	+		Pf6N2E2_5612	0.25	+1.0
6,427,181	+		Pf6N2E2_5612	0.25	-1.1
6,427,373	+		Pf6N2E2_5612	0.52	-0.5
6,427,374	-		Pf6N2E2_5612	0.52	-0.5
6,427,483	+		Pf6N2E2_5612	0.68	+1.0
6,427,483	+		Pf6N2E2_5612	0.68	-1.3
6,427,483	+		Pf6N2E2_5612	0.68	+0.0
6,427,483	+		Pf6N2E2_5612	0.68	-0.6
6,427,483	+		Pf6N2E2_5612	0.68	+1.0
6,427,483	+		Pf6N2E2_5612	0.68	+0.0
6,427,487	+		Pf6N2E2_5612	0.68	+0.1
6,427,487	+		Pf6N2E2_5612	0.68	+1.0
6,427,487	+		Pf6N2E2_5612	0.68	+1.0
6,427,487	+		Pf6N2E2_5612	0.68	+1.0
6,427,488	-		Pf6N2E2_5612	0.68	+2.6
6,427,488	-		Pf6N2E2_5612	0.68	-0.1
6,427,488	-		Pf6N2E2_5612	0.68	+0.0
6,427,488	-		Pf6N2E2_5612	0.68	+1.0
6,427,746	-				+1.0
6,427,834	+		Pf6N2E2_5613	0.37	+1.0
6,427,834	+		Pf6N2E2_5613	0.37	-1.0