Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5567

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,385,170	+		Pf6N2E2_5566	0.61	-1.3
6,385,171	-		Pf6N2E2_5566	0.61	+0.5
6,385,173	+		Pf6N2E2_5566	0.61	+0.1
6,385,173	+		Pf6N2E2_5566	0.61	+1.1
6,385,174	-		Pf6N2E2_5566	0.61	-1.1
6,385,174	-		Pf6N2E2_5566	0.61	+1.1
6,385,174	-		Pf6N2E2_5566	0.61	-1.5
6,385,261	+		Pf6N2E2_5566	0.65	+1.1
6,385,395	+		Pf6N2E2_5566	0.72	+0.1
6,385,396	-		Pf6N2E2_5566	0.72	+0.1
6,385,396	-		Pf6N2E2_5566	0.72	+1.1
6,385,396	-		Pf6N2E2_5566	0.72	+1.1
6,385,396	-		Pf6N2E2_5566	0.72	-0.9
6,385,398	+		Pf6N2E2_5566	0.72	-0.1
6,385,398	+		Pf6N2E2_5566	0.72	-0.3
6,385,418	-		Pf6N2E2_5566	0.74	+0.1
6,385,431	+		Pf6N2E2_5566	0.74	+0.1
6,385,470	+		Pf6N2E2_5566	0.76	-0.4
6,385,501	-		Pf6N2E2_5566	0.78	+0.1
6,385,501	-		Pf6N2E2_5566	0.78	+0.1
6,385,501	-		Pf6N2E2_5566	0.78	-0.5
6,385,501	-		Pf6N2E2_5566	0.78	-0.2
6,385,501	-		Pf6N2E2_5566	0.78	+1.1
6,385,560	+		Pf6N2E2_5566	0.81	-0.4
6,385,560	+		Pf6N2E2_5566	0.81	-0.5
6,385,560	+		Pf6N2E2_5566	0.81	+1.1
6,385,560	+		Pf6N2E2_5566	0.81	+1.1
6,385,560	+		Pf6N2E2_5566	0.81	+1.1
6,385,561	-		Pf6N2E2_5566	0.81	-0.5
6,385,561	-		Pf6N2E2_5566	0.81	+1.1
6,385,561	-		Pf6N2E2_5566	0.81	+1.1
6,385,602	+		Pf6N2E2_5566	0.83	-0.9
6,385,689	+		Pf6N2E2_5566	0.88	+1.1
6,385,689	+		Pf6N2E2_5566	0.88	+1.1
6,385,689	+		Pf6N2E2_5566	0.88	-1.5
6,385,689	+		Pf6N2E2_5566	0.88	+1.1
6,385,689	+		Pf6N2E2_5566	0.88	-0.8
6,385,690	-		Pf6N2E2_5566	0.88	-0.5
6,385,690	-		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+0.1
6,385,695	+		Pf6N2E2_5566	0.88	+0.2
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	-0.5
6,385,695	+		Pf6N2E2_5566	0.88	-1.8
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,695	+		Pf6N2E2_5566	0.88	+1.1
6,385,696	-		Pf6N2E2_5566	0.88	+1.1
6,385,696	-		Pf6N2E2_5566	0.88	+1.1
6,385,696	-		Pf6N2E2_5566	0.88	-0.9
6,385,696	-		Pf6N2E2_5566	0.88	+1.6
6,385,769	+				+0.5
6,385,769	+				+1.1
6,385,769	+				-0.5
6,385,769	+				+0.2
6,385,770	-				+1.1
6,385,776	+				+0.5
6,385,777	-				+0.1
6,385,777	-				+0.1
6,386,020	+				+1.1
6,386,037	-				+1.1
6,386,045	+				+0.1
6,386,046	-				+1.1
6,386,136	-				+0.1
6,386,136	-				+0.1
6,386,248	+		Pf6N2E2_5567	0.16	+0.5
6,386,248	+		Pf6N2E2_5567	0.16	+1.1
6,386,249	-		Pf6N2E2_5567	0.16	+0.1
6,386,821	+				+0.2
6,386,838	-				+1.1
6,386,859	+				+1.1
6,386,859	+				+1.1
6,386,868	+				-0.9
6,386,868	+				+0.0
6,386,929	+				+1.1
6,386,929	+				-2.3
6,386,930	-				+1.1
6,386,930	-				+1.1
6,386,930	-				-0.1
6,387,025	+		Pf6N2E2_5568	0.24	+0.1
6,387,025	+		Pf6N2E2_5568	0.24	+0.1
6,387,025	+		Pf6N2E2_5568	0.24	-0.5
6,387,025	+		Pf6N2E2_5568	0.24	-0.5
6,387,026	-		Pf6N2E2_5568	0.24	+1.1
6,387,026	-		Pf6N2E2_5568	0.24	+1.1
6,387,130	+		Pf6N2E2_5568	0.39	+0.1
6,387,130	+		Pf6N2E2_5568	0.39	+1.8
6,387,131	-		Pf6N2E2_5568	0.40	-1.5
6,387,131	-		Pf6N2E2_5568	0.40	+1.1
6,387,131	-		Pf6N2E2_5568	0.40	-0.6
6,387,211	+		Pf6N2E2_5568	0.51	+1.1
6,387,211	+		Pf6N2E2_5568	0.51	+1.1
6,387,269	+		Pf6N2E2_5568	0.60	+1.1
6,387,269	+		Pf6N2E2_5568	0.60	+0.5
6,387,270	-		Pf6N2E2_5568	0.60	+0.1
6,387,270	-		Pf6N2E2_5568	0.60	+1.1
6,387,313	+		Pf6N2E2_5568	0.67	-2.3
6,387,313	+		Pf6N2E2_5568	0.67	-0.4
6,387,355	+		Pf6N2E2_5568	0.73	+1.1
6,387,356	-		Pf6N2E2_5568	0.73	-1.4
6,387,356	-		Pf6N2E2_5568	0.73	+1.1
6,387,356	-		Pf6N2E2_5568	0.73	+0.1
6,387,356	-		Pf6N2E2_5568	0.73	+0.3
6,387,356	-		Pf6N2E2_5568	0.73	-0.1
6,387,356	-		Pf6N2E2_5568	0.73	-0.1
6,387,364	+		Pf6N2E2_5568	0.74	+1.1
6,387,537	+				+0.2
6,387,537	+				+1.1
6,387,538	-				+0.1
6,387,538	-				+0.1
6,387,541	+				+1.1
6,387,541	+				-0.4
6,387,627	+		Pf6N2E2_5569	0.12	-0.5
6,387,627	+		Pf6N2E2_5569	0.12	-0.5
6,387,627	+		Pf6N2E2_5569	0.12	-0.3
6,387,627	+		Pf6N2E2_5569	0.12	-0.8
6,387,628	-		Pf6N2E2_5569	0.12	-1.3
6,387,766	+		Pf6N2E2_5569	0.31	+0.2
6,387,767	-		Pf6N2E2_5569	0.31	+1.1
6,387,816	+		Pf6N2E2_5569	0.37	+1.1
6,387,816	+		Pf6N2E2_5569	0.37	+1.1
6,387,817	-		Pf6N2E2_5569	0.38	+0.1