Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5413

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,215,872	+		Pf6N2E2_5412	0.19	+1.0
6,215,876	+		Pf6N2E2_5412	0.20	+0.0
6,215,876	+		Pf6N2E2_5412	0.20	-0.6
6,215,876	+		Pf6N2E2_5412	0.20	+1.0
6,215,876	+		Pf6N2E2_5412	0.20	-2.6
6,215,877	-		Pf6N2E2_5412	0.20	-0.9
6,215,877	-		Pf6N2E2_5412	0.20	+1.0
6,215,877	-		Pf6N2E2_5412	0.20	-1.2
6,215,877	-		Pf6N2E2_5412	0.20	-0.6
6,216,274	+		Pf6N2E2_5412	0.62	-0.9
6,216,274	+		Pf6N2E2_5412	0.62	-0.9
6,216,305	+		Pf6N2E2_5412	0.66	+1.0
6,216,471	+		Pf6N2E2_5412	0.83	-2.0
6,216,471	+		Pf6N2E2_5412	0.83	+0.7
6,216,471	+		Pf6N2E2_5412	0.83	+0.0
6,216,471	+		Pf6N2E2_5412	0.83	-1.1
6,216,472	-		Pf6N2E2_5412	0.84	+1.0
6,216,472	-		Pf6N2E2_5412	0.84	+1.0
6,216,477	+		Pf6N2E2_5412	0.84	+0.0
6,216,477	+		Pf6N2E2_5412	0.84	-0.2
6,216,477	+		Pf6N2E2_5412	0.84	+1.0
6,216,477	+		Pf6N2E2_5412	0.84	-0.1
6,216,478	-		Pf6N2E2_5412	0.84	-1.0
6,216,478	-		Pf6N2E2_5412	0.84	+0.1
6,216,478	-		Pf6N2E2_5412	0.84	+1.0
6,216,491	+		Pf6N2E2_5412	0.86	-1.8
6,216,491	+		Pf6N2E2_5412	0.86	-0.3
6,216,491	+		Pf6N2E2_5412	0.86	-1.0
6,216,491	+		Pf6N2E2_5412	0.86	+1.0
6,216,491	+		Pf6N2E2_5412	0.86	-1.2
6,216,519	+		Pf6N2E2_5412	0.89	+0.4
6,216,520	-		Pf6N2E2_5412	0.89	+1.0
6,216,520	-		Pf6N2E2_5412	0.89	+1.0
6,216,520	-		Pf6N2E2_5412	0.89	+0.1
6,216,520	-		Pf6N2E2_5412	0.89	+0.0
6,216,748	+				+0.0
6,216,748	+				+0.0
6,216,748	+				+1.0
6,216,749	-				+1.0
6,216,749	-				-0.5
6,216,749	-				+1.0
6,216,749	-				+1.0
6,216,749	-				-0.6
6,216,773	+				+0.0
6,216,774	-				+0.0
6,216,788	-		Pf6N2E2_5413	0.12	-0.2
6,216,941	-		Pf6N2E2_5413	0.56	-0.3
6,216,961	+		Pf6N2E2_5413	0.62	+0.0
6,216,961	+		Pf6N2E2_5413	0.62	-0.3
6,216,961	+		Pf6N2E2_5413	0.62	+0.0
6,216,962	-		Pf6N2E2_5413	0.62	+1.0
6,216,962	-		Pf6N2E2_5413	0.62	+0.0
6,216,962	-		Pf6N2E2_5413	0.62	+0.2
6,216,962	-		Pf6N2E2_5413	0.62	+0.6
6,217,109	-				+1.0
6,217,109	-				-0.2
6,217,179	+				+0.0
6,217,303	-		Pf6N2E2_5414	0.20	+1.0
6,217,326	+		Pf6N2E2_5414	0.22	-0.6
6,217,326	+		Pf6N2E2_5414	0.22	-0.0
6,217,327	-		Pf6N2E2_5414	0.22	+0.0
6,217,327	-		Pf6N2E2_5414	0.22	-0.8
6,217,327	-		Pf6N2E2_5414	0.22	+1.0
6,217,327	-		Pf6N2E2_5414	0.22	+1.0
6,217,327	-		Pf6N2E2_5414	0.22	-0.5
6,217,327	-		Pf6N2E2_5414	0.22	-0.2
6,217,414	-		Pf6N2E2_5414	0.31	+1.0
6,217,602	+		Pf6N2E2_5414	0.50	+1.0
6,217,602	+		Pf6N2E2_5414	0.50	+0.1
6,217,602	+		Pf6N2E2_5414	0.50	-0.5
6,217,602	+		Pf6N2E2_5414	0.50	+0.0
6,217,602	+		Pf6N2E2_5414	0.50	-0.4
6,217,602	+		Pf6N2E2_5414	0.50	+0.0
6,217,602	+		Pf6N2E2_5414	0.50	+1.0
6,217,602	+		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.3
6,217,603	-		Pf6N2E2_5414	0.50	+0.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+0.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+0.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+1.0
6,217,603	-		Pf6N2E2_5414	0.50	+0.0
6,217,603	-		Pf6N2E2_5414	0.50	-0.4
6,217,756	-		Pf6N2E2_5414	0.65	+1.0
6,217,756	-		Pf6N2E2_5414	0.65	+1.0
6,217,969	+		Pf6N2E2_5414	0.86	+1.0
6,217,970	-		Pf6N2E2_5414	0.86	+1.0
6,217,971	+		Pf6N2E2_5414	0.86	+0.0
6,217,971	+		Pf6N2E2_5414	0.86	-2.3
6,217,971	+		Pf6N2E2_5414	0.86	-0.6
6,217,971	+		Pf6N2E2_5414	0.86	-0.6
6,217,971	+		Pf6N2E2_5414	0.86	+1.0
6,217,971	+		Pf6N2E2_5414	0.86	+1.0
6,217,971	+		Pf6N2E2_5414	0.86	-0.6
6,217,972	-		Pf6N2E2_5414	0.86	-0.5
6,217,972	-		Pf6N2E2_5414	0.86	+1.0
6,217,972	-		Pf6N2E2_5414	0.86	+0.0
6,217,972	-		Pf6N2E2_5414	0.86	+0.0
6,217,972	-		Pf6N2E2_5414	0.86	+1.8
6,217,972	-		Pf6N2E2_5414	0.86	-0.4
6,217,972	-		Pf6N2E2_5414	0.86	-1.2
6,217,972	-		Pf6N2E2_5414	0.86	+0.2
6,217,972	-		Pf6N2E2_5414	0.86	+1.0
6,217,972	-		Pf6N2E2_5414	0.86	-0.1