Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5375

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
6,175,821	+		Pf6N2E2_5374	0.55	+1.0
6,175,911	+		Pf6N2E2_5374	0.66	+1.0
6,175,911	+		Pf6N2E2_5374	0.66	-0.2
6,175,912	-		Pf6N2E2_5374	0.66	+1.0
6,175,912	-		Pf6N2E2_5374	0.66	+1.0
6,175,912	-		Pf6N2E2_5374	0.66	+1.0
6,176,028	+		Pf6N2E2_5374	0.79	-0.1
6,176,028	+		Pf6N2E2_5374	0.79	+0.0
6,176,029	-		Pf6N2E2_5374	0.79	-0.6
6,176,029	-		Pf6N2E2_5374	0.79	-0.2
6,176,137	+				-1.3
6,176,310	+				-0.9
6,176,364	+				+1.0
6,176,364	+				+1.0
6,176,364	+				+0.0
6,176,365	-				+0.0
6,176,365	-				+1.0
6,176,365	-				+0.0
6,176,457	+				+1.0
6,176,457	+				+1.0
6,176,458	-				+1.0
6,176,481	+				+0.0
6,176,482	-				+0.0
6,176,877	+		Pf6N2E2_5375	0.48	-0.0
6,177,192	-		Pf6N2E2_5375	0.86	+0.0
6,177,192	-		Pf6N2E2_5375	0.86	+1.0
6,177,529	+		Pf6N2E2_5376	0.40	+1.0
6,177,530	-		Pf6N2E2_5376	0.40	-0.9
6,177,530	-		Pf6N2E2_5376	0.40	+0.0
6,177,627	-		Pf6N2E2_5376	0.61	+0.0
6,177,628	+		Pf6N2E2_5376	0.62	-0.6
6,177,628	+		Pf6N2E2_5376	0.62	+2.6
6,177,628	+		Pf6N2E2_5376	0.62	-0.6
6,177,628	+		Pf6N2E2_5376	0.62	-0.5
6,177,628	+		Pf6N2E2_5376	0.62	+1.0
6,177,628	+		Pf6N2E2_5376	0.62	+0.0
6,177,628	+		Pf6N2E2_5376	0.62	+1.0
6,177,628	+		Pf6N2E2_5376	0.62	+1.0
6,177,628	+		Pf6N2E2_5376	0.62	+0.0
6,177,629	-		Pf6N2E2_5376	0.62	-0.5
6,177,629	-		Pf6N2E2_5376	0.62	+0.4
6,177,629	-		Pf6N2E2_5376	0.62	+1.0
6,177,629	-		Pf6N2E2_5376	0.62	+1.0
6,177,629	-		Pf6N2E2_5376	0.62	-0.7
6,177,629	-		Pf6N2E2_5376	0.62	+1.0
6,177,629	-		Pf6N2E2_5376	0.62	+1.0
6,177,629	-		Pf6N2E2_5376	0.62	-0.2
6,177,629	-		Pf6N2E2_5376	0.62	-0.2
6,177,633	+		Pf6N2E2_5376	0.63	+0.4
6,177,956	+				+1.0
6,177,956	+				+1.0
6,177,956	+				+0.0
6,177,956	+				+1.0
6,177,957	-				-0.3
6,177,957	-				-0.4
6,177,957	-				-0.7
6,177,957	-				+1.0
6,177,957	-				+1.0
6,177,980	-				+1.0
6,178,033	+				-0.3
6,178,033	+				+1.0
6,178,033	+				+1.0
6,178,034	-				-0.6
6,178,034	-				-0.6
6,178,034	-				+0.0
6,178,072	+				-1.0
6,178,072	+				+1.0
6,178,073	-				+1.0
6,178,153	+		Pf6N2E2_5377	0.12	-0.6
6,178,153	+		Pf6N2E2_5377	0.12	+1.0
6,178,153	+		Pf6N2E2_5377	0.12	-1.0
6,178,153	+		Pf6N2E2_5377	0.12	+0.6
6,178,153	+		Pf6N2E2_5377	0.12	+0.5
6,178,154	-		Pf6N2E2_5377	0.12	+0.0
6,178,154	-		Pf6N2E2_5377	0.12	-0.8
6,178,154	-		Pf6N2E2_5377	0.12	+0.0