Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4973

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,737,246	+		Pf6N2E2_4971	0.86	-0.5
5,737,247	-		Pf6N2E2_4971	0.86	+1.1
5,737,247	-		Pf6N2E2_4971	0.86	-0.2
5,737,268	+		Pf6N2E2_4971	0.89	+0.1
5,737,268	+		Pf6N2E2_4971	0.89	-0.0
5,737,269	-		Pf6N2E2_4971	0.89	-1.1
5,737,310	-				-0.5
5,737,387	+				+0.2
5,737,407	-				+1.1
5,737,408	+				+1.1
5,737,408	+				-0.0
5,737,409	-				+1.1
5,737,409	-				+1.1
5,737,409	-				-0.5
5,737,409	-				+1.1
5,737,495	+				+0.1
5,737,502	+				+1.1
5,738,139	-				-0.3
5,738,139	-				+0.1
5,738,139	-				+1.1
5,738,145	-				-2.1
5,738,145	-				-0.7
5,738,178	-				+1.1
5,738,186	+				+0.1
5,738,186	+				-1.5
5,738,187	-				+0.6
5,738,187	-				+1.1
5,738,187	-				-0.8
5,738,187	-				-1.5
5,738,187	-				+0.1
5,738,187	-				-0.0
5,738,190	-				+1.1
5,738,190	-				+0.1
5,738,190	-				+0.1
5,738,190	-				+0.1
5,738,190	-				-0.5
5,738,190	-				+0.1
5,738,202	-				-0.2
5,738,256	-				-0.5
5,738,276	+		Pf6N2E2_4973	0.11	-0.5
5,738,276	+		Pf6N2E2_4973	0.11	-0.9
5,738,277	-		Pf6N2E2_4973	0.11	-0.6
5,738,277	-		Pf6N2E2_4973	0.11	-0.9
5,738,277	-		Pf6N2E2_4973	0.11	-1.8
5,738,277	-		Pf6N2E2_4973	0.11	-1.1
5,738,325	-		Pf6N2E2_4973	0.17	+1.1
5,738,325	-		Pf6N2E2_4973	0.17	+1.1
5,738,325	-		Pf6N2E2_4973	0.17	+0.1
5,738,325	-		Pf6N2E2_4973	0.17	+1.1
5,738,370	-		Pf6N2E2_4973	0.23	+0.1
5,738,552	+		Pf6N2E2_4973	0.45	+0.1
5,738,552	+		Pf6N2E2_4973	0.45	+1.1
5,738,729	+		Pf6N2E2_4973	0.67	+0.1
5,739,137	+		Pf6N2E2_4974	0.21	-0.5
5,739,137	+		Pf6N2E2_4974	0.21	-0.5
5,739,138	-		Pf6N2E2_4974	0.21	+1.1
5,739,207	-		Pf6N2E2_4974	0.31	+0.1
5,739,207	-		Pf6N2E2_4974	0.31	+0.1
5,739,207	-		Pf6N2E2_4974	0.31	-1.5
5,739,207	-		Pf6N2E2_4974	0.31	-0.5
5,739,302	+		Pf6N2E2_4974	0.46	-0.5
5,739,302	+		Pf6N2E2_4974	0.46	+1.1
5,739,326	+		Pf6N2E2_4974	0.50	+0.2
5,739,326	+		Pf6N2E2_4974	0.50	+0.1
5,739,395	+		Pf6N2E2_4974	0.60	+1.1
5,739,396	-		Pf6N2E2_4974	0.60	+1.1
5,739,396	-		Pf6N2E2_4974	0.60	+1.1
5,739,396	-		Pf6N2E2_4974	0.60	-0.5
5,739,396	-		Pf6N2E2_4974	0.60	+0.1
5,739,570	-		Pf6N2E2_4974	0.87	+1.1
5,739,584	+		Pf6N2E2_4974	0.90	+0.1
5,739,608	+				+0.1
5,739,608	+				-0.5
5,739,608	+				+0.1
5,739,655	+				+1.1
5,739,655	+				+1.1
5,739,655	+				-0.5
5,739,655	+				+0.1
5,739,655	+				+0.1
5,739,655	+				-0.5
5,739,655	+				-1.3
5,739,656	-				+1.1
5,739,722	-				-0.5
5,739,722	-				+1.1
5,739,722	-				+1.1
5,739,732	+				-0.9
5,739,732	+				-0.4
5,739,755	-				+0.1
5,739,756	+				-0.4
5,739,757	-				+0.1
5,739,757	-				+0.1
5,739,757	-				+1.1
5,739,790	+				-0.2
5,739,790	+				+1.1
5,739,790	+				+1.1
5,739,790	+				-0.5
5,739,936	+				+0.1
5,739,962	+				+0.1
5,739,975	+				+0.1
5,739,975	+				+1.1
5,739,976	-				+1.1