Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4757

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,495,509	+		Pf6N2E2_4756	0.51	-0.3
5,495,729	+		Pf6N2E2_4756	0.63	-0.9
5,495,729	+		Pf6N2E2_4756	0.63	+0.1
5,495,729	+		Pf6N2E2_4756	0.63	+0.1
5,495,729	+		Pf6N2E2_4756	0.63	+0.1
5,495,729	+		Pf6N2E2_4756	0.63	-0.5
5,495,729	+		Pf6N2E2_4756	0.63	+1.1
5,495,730	-		Pf6N2E2_4756	0.63	-0.5
5,495,730	-		Pf6N2E2_4756	0.63	+1.1
5,495,730	-		Pf6N2E2_4756	0.63	+1.1
5,495,730	-		Pf6N2E2_4756	0.63	-0.5
5,495,730	-		Pf6N2E2_4756	0.63	-0.6
5,495,879	+		Pf6N2E2_4756	0.71	+1.1
5,496,008	+		Pf6N2E2_4756	0.77	+0.1
5,496,008	+		Pf6N2E2_4756	0.77	+1.1
5,496,008	+		Pf6N2E2_4756	0.77	+1.1
5,496,008	+		Pf6N2E2_4756	0.77	-1.2
5,496,008	+		Pf6N2E2_4756	0.77	+1.1
5,496,008	+		Pf6N2E2_4756	0.77	-1.2
5,496,009	-		Pf6N2E2_4756	0.77	-1.2
5,496,009	-		Pf6N2E2_4756	0.77	+0.1
5,496,009	-		Pf6N2E2_4756	0.77	+1.1
5,496,009	-		Pf6N2E2_4756	0.77	-0.5
5,496,014	+		Pf6N2E2_4756	0.78	+1.1
5,496,014	+		Pf6N2E2_4756	0.78	+1.1
5,496,014	+		Pf6N2E2_4756	0.78	-0.7
5,496,014	+		Pf6N2E2_4756	0.78	+0.1
5,496,014	+		Pf6N2E2_4756	0.78	-0.4
5,496,014	+		Pf6N2E2_4756	0.78	+2.1
5,496,014	+		Pf6N2E2_4756	0.78	-0.9
5,496,014	+		Pf6N2E2_4756	0.78	+0.1
5,496,014	+		Pf6N2E2_4756	0.78	+0.1
5,496,015	-		Pf6N2E2_4756	0.78	-0.9
5,496,015	-		Pf6N2E2_4756	0.78	-1.3
5,496,015	-		Pf6N2E2_4756	0.78	+1.1
5,496,015	-		Pf6N2E2_4756	0.78	-0.4
5,496,015	-		Pf6N2E2_4756	0.78	+1.1
5,496,015	-		Pf6N2E2_4756	0.78	-0.5
5,496,015	-		Pf6N2E2_4756	0.78	+1.1
5,496,023	+		Pf6N2E2_4756	0.78	+1.1
5,496,023	+		Pf6N2E2_4756	0.78	+1.1
5,496,206	+		Pf6N2E2_4756	0.88	+1.1
5,496,207	-		Pf6N2E2_4756	0.88	+0.1
5,496,424	+				-0.6
5,496,424	+				-0.5
5,496,424	+				-0.5
5,496,424	+				-0.9
5,496,424	+				+1.1
5,496,425	-				+1.1
5,496,425	-				+1.1
5,496,425	-				+1.1
5,496,425	-				+0.1
5,496,427	+				-0.9
5,496,427	+				+1.1
5,496,427	+				+1.1
5,496,427	+				+0.5
5,496,428	-				+0.1
5,496,487	+				+1.1
5,496,487	+				-0.5
5,496,487	+				+0.0
5,496,487	+				+1.1
5,496,487	+				+1.1
5,496,487	+				+0.1
5,496,488	-				+0.1
5,496,488	-				-0.7
5,496,488	-				-0.5
5,496,488	-				-0.3
5,496,488	-				+0.3
5,496,503	+				-0.5
5,496,503	+				+0.1
5,496,504	-				-0.5
5,496,504	-				-0.9
5,496,583	+		Pf6N2E2_4757	0.11	+0.1
5,496,696	+		Pf6N2E2_4757	0.25	+1.1
5,496,696	+		Pf6N2E2_4757	0.25	+0.1
5,496,697	-		Pf6N2E2_4757	0.25	+0.3
5,496,733	+		Pf6N2E2_4757	0.30	+0.1
5,496,733	+		Pf6N2E2_4757	0.30	+0.6
5,496,733	+		Pf6N2E2_4757	0.30	+0.1
5,496,733	+		Pf6N2E2_4757	0.30	+0.7
5,496,734	-		Pf6N2E2_4757	0.30	+1.1
5,496,902	+		Pf6N2E2_4757	0.52	+1.1
5,496,902	+		Pf6N2E2_4757	0.52	+1.1
5,496,902	+		Pf6N2E2_4757	0.52	-0.9
5,496,903	-		Pf6N2E2_4757	0.52	-0.7
5,496,903	-		Pf6N2E2_4757	0.52	+1.1
5,496,903	-		Pf6N2E2_4757	0.52	+1.1
5,496,982	+		Pf6N2E2_4757	0.63	+1.1
5,496,982	+		Pf6N2E2_4757	0.63	+1.1
5,496,982	+		Pf6N2E2_4757	0.63	-0.4
5,496,982	+		Pf6N2E2_4757	0.63	-0.4
5,496,982	+		Pf6N2E2_4757	0.63	+1.1
5,496,982	+		Pf6N2E2_4757	0.63	-0.9
5,496,982	+		Pf6N2E2_4757	0.63	+0.1
5,496,983	-		Pf6N2E2_4757	0.63	+1.1
5,496,983	-		Pf6N2E2_4757	0.63	-0.3
5,496,983	-		Pf6N2E2_4757	0.63	-0.1
5,496,983	-		Pf6N2E2_4757	0.63	+0.1
5,497,014	-		Pf6N2E2_4757	0.67	-0.1
5,497,146	-		Pf6N2E2_4757	0.84	+0.1
5,497,146	-		Pf6N2E2_4757	0.84	+1.0
5,497,365	+				+1.1
5,497,365	+				+0.1
5,497,365	+				+1.1
5,497,365	+				-1.5
5,497,366	-				+1.1
5,497,366	-				+1.1
5,497,366	-				+1.1
5,497,366	-				+0.1
5,497,821	+		Pf6N2E2_4758	0.67	-1.2
5,497,822	-		Pf6N2E2_4758	0.67	-0.9
5,497,822	-		Pf6N2E2_4758	0.67	-0.5
5,497,966	+		Pf6N2E2_4758	0.87	-0.5
5,497,966	+		Pf6N2E2_4758	0.87	-0.8
5,497,966	+		Pf6N2E2_4758	0.87	+0.1
5,497,967	-		Pf6N2E2_4758	0.87	-0.1
5,497,967	-		Pf6N2E2_4758	0.87	+1.1
5,497,967	-		Pf6N2E2_4758	0.87	-0.2
5,497,967	-		Pf6N2E2_4758	0.87	+0.1
5,498,076	+				+0.6
5,498,076	+				+1.1
5,498,076	+				+1.1
5,498,076	+				+0.1
5,498,076	+				-0.5
5,498,077	-				-0.5
5,498,077	-				+1.1
5,498,077	-				-0.9
5,498,080	+				-0.5
5,498,080	+				+0.1
5,498,080	+				-1.5
5,498,080	+				-0.5
5,498,081	-				+1.1
5,498,140	+				+1.1
5,498,140	+				-0.5
5,498,140	+				-0.9
5,498,141	-				+1.1
5,498,141	-				+0.1
5,498,141	-				+0.1
5,498,141	-				+0.1
5,498,141	-				+1.1
5,498,141	-				+1.1
5,498,141	-				+1.1