Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4732

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,469,042	+		Pf6N2E2_4730	0.83	+0.1
5,469,042	+		Pf6N2E2_4730	0.83	+0.5
5,469,043	-		Pf6N2E2_4730	0.83	+0.1
5,469,043	-		Pf6N2E2_4730	0.83	+1.1
5,469,043	-		Pf6N2E2_4730	0.83	-0.5
5,469,102	+				-0.8
5,469,166	+				-0.5
5,469,167	-				-0.5
5,469,167	-				-0.7
5,469,207	+				+0.1
5,469,208	-				+0.1
5,469,210	-				+1.1
5,469,222	+				-0.5
5,469,228	-				+0.1
5,469,229	+				-1.5
5,469,233	+				-1.6
5,469,296	+				+1.1
5,469,321	+				-0.9
5,469,321	+				-0.9
5,469,321	+				-0.4
5,469,322	-				+0.2
5,469,322	-				+1.1
5,469,322	-				+1.1
5,469,328	-				+0.1
5,469,366	+				+1.1
5,469,400	+				+0.1
5,469,400	+				+0.3
5,469,401	-				+1.1
5,469,401	-				+1.1
5,469,401	-				+0.1
5,469,744	+		Pf6N2E2_4731	0.52	-0.5
5,469,744	+		Pf6N2E2_4731	0.52	-0.5
5,469,745	-		Pf6N2E2_4731	0.52	-1.2
5,469,745	-		Pf6N2E2_4731	0.52	+1.1
5,469,756	+		Pf6N2E2_4731	0.54	+0.5
5,469,757	-		Pf6N2E2_4731	0.54	+1.1
5,469,757	-		Pf6N2E2_4731	0.54	+1.1
5,469,906	+		Pf6N2E2_4731	0.78	+0.1
5,469,906	+		Pf6N2E2_4731	0.78	+1.1
5,469,907	-		Pf6N2E2_4731	0.78	+0.1
5,469,916	+		Pf6N2E2_4731	0.80	+1.1
5,469,917	-		Pf6N2E2_4731	0.80	+0.1
5,469,917	-		Pf6N2E2_4731	0.80	-1.5
5,470,074	+		Pf6N2E2_4732	0.29	-0.9
5,470,074	+		Pf6N2E2_4732	0.29	+0.1
5,470,075	-		Pf6N2E2_4732	0.30	+0.1
5,470,140	+		Pf6N2E2_4732	0.70	+0.1
5,470,177	+				+1.1
5,470,177	+				-0.3
5,470,178	-				+0.4
5,470,178	-				+1.1
5,470,178	-				+0.1
5,470,349	-		Pf6N2E2_4733	0.73	-0.5
5,470,394	+				+1.1
5,470,425	-				+1.1
5,470,425	-				+1.1
5,470,425	-				+1.1
5,470,425	-				-0.9
5,470,493	+				-0.3
5,470,494	-				+0.1
5,470,532	+				-0.1
5,470,606	+				+0.0
5,470,606	+				+0.1
5,470,685	-				+0.2
5,470,685	-				-0.9
5,470,696	+				+0.1
5,470,915	+		Pf6N2E2_4734	0.25	+1.1
5,470,915	+		Pf6N2E2_4734	0.25	-1.9
5,471,065	+		Pf6N2E2_4734	0.41	+1.1
5,471,065	+		Pf6N2E2_4734	0.41	-0.3
5,471,065	+		Pf6N2E2_4734	0.41	+1.1
5,471,065	+		Pf6N2E2_4734	0.41	-1.1
5,471,065	+		Pf6N2E2_4734	0.41	-0.5
5,471,066	-		Pf6N2E2_4734	0.41	-0.5
5,471,066	-		Pf6N2E2_4734	0.41	+0.1
5,471,066	-		Pf6N2E2_4734	0.41	+1.1
5,471,066	-		Pf6N2E2_4734	0.41	+1.1
5,471,173	+		Pf6N2E2_4734	0.53	+0.1
5,471,174	-		Pf6N2E2_4734	0.54	-0.9
5,471,174	-		Pf6N2E2_4734	0.54	+0.4