Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4727

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,465,818	-				-0.5
5,465,840	-		Pf6N2E2_4726	0.11	-0.5
5,466,161	+		Pf6N2E2_4726	0.42	+1.1
5,466,161	+		Pf6N2E2_4726	0.42	+0.1
5,466,164	+		Pf6N2E2_4726	0.42	+1.1
5,466,164	+		Pf6N2E2_4726	0.42	-0.2
5,466,165	-		Pf6N2E2_4726	0.43	+1.1
5,466,166	+		Pf6N2E2_4726	0.43	-0.7
5,466,273	+		Pf6N2E2_4726	0.53	-0.9
5,466,279	+		Pf6N2E2_4726	0.54	-0.3
5,466,279	+		Pf6N2E2_4726	0.54	-1.8
5,466,279	+		Pf6N2E2_4726	0.54	-0.5
5,466,279	+		Pf6N2E2_4726	0.54	+1.1
5,466,279	+		Pf6N2E2_4726	0.54	+1.1
5,466,279	+		Pf6N2E2_4726	0.54	+0.1
5,466,279	+		Pf6N2E2_4726	0.54	-0.0
5,466,279	+		Pf6N2E2_4726	0.54	-0.9
5,466,279	+		Pf6N2E2_4726	0.54	+1.1
5,466,280	-		Pf6N2E2_4726	0.54	+1.1
5,466,280	-		Pf6N2E2_4726	0.54	+1.1
5,466,280	-		Pf6N2E2_4726	0.54	+0.1
5,466,280	-		Pf6N2E2_4726	0.54	+0.1
5,466,280	-		Pf6N2E2_4726	0.54	-0.3
5,466,280	-		Pf6N2E2_4726	0.54	+0.7
5,466,280	-		Pf6N2E2_4726	0.54	+0.1
5,466,280	-		Pf6N2E2_4726	0.54	+1.1
5,466,280	-		Pf6N2E2_4726	0.54	+1.1
5,466,280	-		Pf6N2E2_4726	0.54	+0.1
5,466,283	+		Pf6N2E2_4726	0.54	-0.4
5,466,283	+		Pf6N2E2_4726	0.54	-0.5
5,466,283	+		Pf6N2E2_4726	0.54	-0.2
5,466,283	+		Pf6N2E2_4726	0.54	+1.1
5,466,283	+		Pf6N2E2_4726	0.54	-0.0
5,466,283	+		Pf6N2E2_4726	0.54	+1.1
5,466,283	+		Pf6N2E2_4726	0.54	+1.1
5,466,283	+		Pf6N2E2_4726	0.54	-0.5
5,466,283	+		Pf6N2E2_4726	0.54	+0.1
5,466,283	+		Pf6N2E2_4726	0.54	+1.1
5,466,284	-		Pf6N2E2_4726	0.54	+0.2
5,466,284	-		Pf6N2E2_4726	0.54	+1.1
5,466,367	+		Pf6N2E2_4726	0.62	+0.1
5,466,378	+		Pf6N2E2_4726	0.63	+0.1
5,466,378	+		Pf6N2E2_4726	0.63	+0.1
5,466,427	+		Pf6N2E2_4726	0.68	+1.1
5,466,428	-		Pf6N2E2_4726	0.68	+1.1
5,466,468	+		Pf6N2E2_4726	0.72	+1.1
5,466,480	+		Pf6N2E2_4726	0.73	+0.1
5,466,532	+		Pf6N2E2_4726	0.78	-0.1
5,466,536	+		Pf6N2E2_4726	0.78	-0.5
5,466,536	+		Pf6N2E2_4726	0.78	+0.6
5,466,537	-		Pf6N2E2_4726	0.79	+0.1
5,466,537	-		Pf6N2E2_4726	0.79	+1.1
5,466,537	-		Pf6N2E2_4726	0.79	-0.8
5,466,537	-		Pf6N2E2_4726	0.79	+1.1
5,466,537	-		Pf6N2E2_4726	0.79	+1.1
5,466,537	-		Pf6N2E2_4726	0.79	+1.1
5,466,537	-		Pf6N2E2_4726	0.79	+1.1
5,466,537	-		Pf6N2E2_4726	0.79	+2.1
5,466,537	-		Pf6N2E2_4726	0.79	+0.1
5,466,578	+		Pf6N2E2_4726	0.83	+0.1
5,466,579	-		Pf6N2E2_4726	0.83	+1.1
5,466,616	+		Pf6N2E2_4726	0.86	+1.1
5,466,616	+		Pf6N2E2_4726	0.86	+1.2
5,466,616	+		Pf6N2E2_4726	0.86	-0.5
5,466,617	-		Pf6N2E2_4726	0.86	+1.1
5,466,617	-		Pf6N2E2_4726	0.86	+0.1
5,466,617	-		Pf6N2E2_4726	0.86	-0.5
5,466,626	+		Pf6N2E2_4726	0.87	+0.5
5,466,627	-		Pf6N2E2_4726	0.87	+0.1
5,466,627	-		Pf6N2E2_4726	0.87	-0.5
5,466,627	-		Pf6N2E2_4726	0.87	-2.2
5,466,654	+				+0.7
5,466,655	-				+0.1
5,466,655	-				+1.1
5,466,717	+				-0.9
5,466,718	-				-0.6
5,466,718	-				+1.1
5,466,793	+				-0.1
5,466,868	+		Pf6N2E2_4727	0.40	-0.5
5,466,868	+		Pf6N2E2_4727	0.40	-0.5
5,466,868	+		Pf6N2E2_4727	0.40	+1.1
5,466,868	+		Pf6N2E2_4727	0.40	+1.1
5,466,868	+		Pf6N2E2_4727	0.40	+1.1
5,466,868	+		Pf6N2E2_4727	0.40	-0.5
5,466,869	-		Pf6N2E2_4727	0.41	+0.1
5,466,871	-		Pf6N2E2_4727	0.42	+1.1
5,466,942	+		Pf6N2E2_4727	0.75	-2.9
5,467,071	+				+0.1
5,467,072	-				+1.1
5,467,072	-				-0.8
5,467,094	+				-0.3
5,467,094	+				-0.5
5,467,094	+				+1.1
5,467,095	-				-0.5
5,467,095	-				-0.9
5,467,112	+				+1.1
5,467,112	+				+1.1
5,467,112	+				+1.1
5,467,113	-				+1.1
5,467,113	-				-0.9
5,467,113	-				-0.0
5,467,132	+				-0.4
5,467,150	-				-0.9
5,467,321	+		Pf6N2E2_4728	0.40	+2.1
5,467,321	+		Pf6N2E2_4728	0.40	+0.4
5,467,321	+		Pf6N2E2_4728	0.40	+1.1
5,467,322	-		Pf6N2E2_4728	0.40	-0.5
5,467,346	+		Pf6N2E2_4728	0.47	+1.8
5,467,435	+		Pf6N2E2_4728	0.71	-0.4
5,467,436	-		Pf6N2E2_4728	0.72	-0.9
5,467,436	-		Pf6N2E2_4728	0.72	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+0.1
5,467,513	+				-0.5
5,467,513	+				+1.1
5,467,514	-				+0.1
5,467,514	-				+1.1
5,467,514	-				+1.1
5,467,514	-				-0.5
5,467,635	+				-1.2
5,467,635	+				-0.5
5,467,635	+				+1.1
5,467,635	+				+1.1
5,467,635	+				+0.1
5,467,635	+				-1.2
5,467,635	+				+0.1
5,467,636	-				-0.3
5,467,636	-				+0.1
5,467,636	-				+1.1
5,467,640	+				-0.3
5,467,686	+				+1.1
5,467,686	+				-0.5
5,467,686	+				+0.1
5,467,686	+				-0.5
5,467,686	+				-0.5
5,467,686	+				+0.1
5,467,686	+				+1.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				-0.1
5,467,687	-				-1.5
5,467,687	-				-0.2
5,467,687	-				+1.1
5,467,688	+				+0.1
5,467,688	+				-0.5
5,467,688	+				-0.9
5,467,688	+				+1.1
5,467,689	-				+0.1
5,467,689	-				+0.1
5,467,689	-				-0.9
5,467,700	-				-1.2
5,467,742	+				+0.3
5,467,743	-				+1.1
5,467,743	-				+1.1
5,467,743	-				-1.2
5,467,743	-				-0.2
5,467,768	-				-0.5
5,467,808	+				-1.4
5,467,808	+				+1.1
5,467,809	-				-0.5
5,467,883	-				+0.1
5,467,911	-				+1.1
5,467,956	+				-0.5
5,467,957	-				+0.1