Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4651

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,380,132	+		Pf6N2E2_4650	0.55	-1.2
5,380,132	+		Pf6N2E2_4650	0.55	+1.1
5,380,132	+		Pf6N2E2_4650	0.55	-1.2
5,380,133	-		Pf6N2E2_4650	0.55	-0.5
5,380,133	-		Pf6N2E2_4650	0.55	+0.1
5,380,340	-		Pf6N2E2_4650	0.68	+1.1
5,380,340	-		Pf6N2E2_4650	0.68	+0.1
5,380,340	-		Pf6N2E2_4650	0.68	-1.5
5,380,340	-		Pf6N2E2_4650	0.68	+1.1
5,380,340	-		Pf6N2E2_4650	0.68	+1.1
5,380,340	-		Pf6N2E2_4650	0.68	+1.1
5,380,340	-		Pf6N2E2_4650	0.68	+0.1
5,380,608	+		Pf6N2E2_4650	0.84	+0.1
5,380,609	-		Pf6N2E2_4650	0.84	+1.1
5,380,699	+		Pf6N2E2_4650	0.89	-0.2
5,380,699	+		Pf6N2E2_4650	0.89	-1.2
5,380,699	+		Pf6N2E2_4650	0.89	+0.1
5,380,699	+		Pf6N2E2_4650	0.89	+0.1
5,380,699	+		Pf6N2E2_4650	0.89	-0.1
5,380,700	-		Pf6N2E2_4650	0.89	+1.1
5,380,700	-		Pf6N2E2_4650	0.89	-0.1
5,380,700	-		Pf6N2E2_4650	0.89	+1.1
5,380,700	-		Pf6N2E2_4650	0.89	-0.9
5,380,700	-		Pf6N2E2_4650	0.89	+0.1
5,380,700	-		Pf6N2E2_4650	0.89	+1.1
5,380,700	-		Pf6N2E2_4650	0.89	-0.5
5,380,700	-		Pf6N2E2_4650	0.89	+1.1
5,380,700	-		Pf6N2E2_4650	0.89	-0.5
5,380,700	-		Pf6N2E2_4650	0.89	+0.0
5,380,700	-		Pf6N2E2_4650	0.89	+0.1
5,380,738	+				+1.1
5,380,738	+				+1.1
5,380,738	+				+0.1
5,380,738	+				-0.2
5,380,738	+				+1.1
5,380,738	+				-0.6
5,380,738	+				-0.2
5,380,738	+				+1.1
5,380,739	-				-0.5
5,380,867	+				-0.5
5,380,867	+				+0.1
5,380,868	-				-0.5
5,380,868	-				+0.1
5,380,868	-				-0.5
5,380,907	+				-0.9
5,380,908	-				-0.9
5,381,342	+		Pf6N2E2_4651	0.41	+1.1
5,381,342	+		Pf6N2E2_4651	0.41	+0.1
5,381,343	-		Pf6N2E2_4651	0.41	+0.1
5,381,343	-		Pf6N2E2_4651	0.41	-1.9
5,381,343	-		Pf6N2E2_4651	0.41	+0.1
5,381,343	-		Pf6N2E2_4651	0.41	+0.1
5,381,343	-		Pf6N2E2_4651	0.41	+0.1
5,381,499	+		Pf6N2E2_4651	0.66	+1.1
5,381,499	+		Pf6N2E2_4651	0.66	+0.1
5,381,582	+		Pf6N2E2_4651	0.79	+0.1
5,381,582	+		Pf6N2E2_4651	0.79	+1.1
5,381,582	+		Pf6N2E2_4651	0.79	-0.2
5,381,582	+		Pf6N2E2_4651	0.79	+2.7
5,381,582	+		Pf6N2E2_4651	0.79	+1.1
5,381,583	-		Pf6N2E2_4651	0.79	+0.4
5,381,583	-		Pf6N2E2_4651	0.79	+1.1
5,381,583	-		Pf6N2E2_4651	0.79	+1.1
5,381,583	-		Pf6N2E2_4651	0.79	+0.1
5,381,583	-		Pf6N2E2_4651	0.79	+0.4
5,381,583	-		Pf6N2E2_4651	0.79	+0.1
5,381,583	-		Pf6N2E2_4651	0.79	-0.5
5,381,588	+		Pf6N2E2_4651	0.80	+2.1
5,381,588	+		Pf6N2E2_4651	0.80	+0.1
5,381,588	+		Pf6N2E2_4651	0.80	+0.2
5,381,588	+		Pf6N2E2_4651	0.80	+0.4
5,381,588	+		Pf6N2E2_4651	0.80	+0.2
5,381,588	+		Pf6N2E2_4651	0.80	-0.5
5,381,588	+		Pf6N2E2_4651	0.80	+1.1
5,381,588	+		Pf6N2E2_4651	0.80	-0.9
5,381,588	+		Pf6N2E2_4651	0.80	+0.1
5,381,588	+		Pf6N2E2_4651	0.80	-0.4
5,381,588	+		Pf6N2E2_4651	0.80	+0.1
5,381,589	-		Pf6N2E2_4651	0.80	-0.6
5,381,589	-		Pf6N2E2_4651	0.80	+1.1
5,381,589	-		Pf6N2E2_4651	0.80	+0.1
5,381,589	-		Pf6N2E2_4651	0.80	+0.1
5,381,589	-		Pf6N2E2_4651	0.80	+2.1
5,381,589	-		Pf6N2E2_4651	0.80	+0.5
5,381,589	-		Pf6N2E2_4651	0.80	+0.1
5,381,589	-		Pf6N2E2_4651	0.80	-0.5
5,381,589	-		Pf6N2E2_4651	0.80	+0.0
5,381,589	-		Pf6N2E2_4651	0.80	+0.1
5,381,600	+		Pf6N2E2_4651	0.82	+1.1
5,381,601	-		Pf6N2E2_4651	0.82	+0.1
5,381,601	-		Pf6N2E2_4651	0.82	-0.9
5,381,708	+				+0.1
5,381,708	+				+0.1
5,381,708	+				-1.2
5,381,708	+				-1.0
5,381,708	+				+1.1
5,381,708	+				-0.2
5,381,708	+				+1.1
5,381,709	-				+0.5
5,381,709	-				-1.2
5,381,774	+				+1.1
5,381,774	+				+0.1
5,381,774	+				+0.1
5,381,774	+				+0.1
5,381,774	+				+1.1
5,381,794	+				+1.1
5,381,794	+				+1.1
5,381,861	-				-0.3
5,381,928	-				+1.1
5,381,928	-				-0.5