Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4310

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
5,024,788	+				-0.2
5,024,987	+		Pf6N2E2_4309	0.13	+0.1
5,024,987	+		Pf6N2E2_4309	0.13	-0.5
5,024,988	-		Pf6N2E2_4309	0.13	+1.1
5,025,004	+		Pf6N2E2_4309	0.15	-0.7
5,025,223	+		Pf6N2E2_4309	0.40	+1.1
5,025,224	-		Pf6N2E2_4309	0.40	-1.5
5,025,296	+		Pf6N2E2_4309	0.49	+0.1
5,025,297	-		Pf6N2E2_4309	0.49	+1.1
5,025,297	-		Pf6N2E2_4309	0.49	+1.1
5,025,297	-		Pf6N2E2_4309	0.49	+1.1
5,025,409	+		Pf6N2E2_4309	0.62	-0.4
5,025,409	+		Pf6N2E2_4309	0.62	+0.1
5,025,409	+		Pf6N2E2_4309	0.62	-0.2
5,025,409	+		Pf6N2E2_4309	0.62	-0.5
5,025,410	-		Pf6N2E2_4309	0.62	+0.3
5,025,410	-		Pf6N2E2_4309	0.62	+1.1
5,025,410	-		Pf6N2E2_4309	0.62	+1.1
5,025,497	-		Pf6N2E2_4309	0.72	-0.5
5,025,559	+		Pf6N2E2_4309	0.79	+1.1
5,025,560	-		Pf6N2E2_4309	0.79	+1.1
5,025,643	+		Pf6N2E2_4309	0.89	-0.5
5,025,697	+				-1.2
5,025,736	+				+1.1
5,025,737	-				-1.1
5,025,875	+				+1.1
5,025,876	-				+1.1
5,026,080	+				+1.1
5,026,149	-		Pf6N2E2_4310	0.12	+1.1
5,026,277	+		Pf6N2E2_4310	0.15	+0.1
5,026,278	-		Pf6N2E2_4310	0.15	+1.1
5,026,365	+		Pf6N2E2_4310	0.18	+0.1
5,026,366	-		Pf6N2E2_4310	0.18	-1.0
5,026,417	-		Pf6N2E2_4310	0.19	+1.1
5,026,417	-		Pf6N2E2_4310	0.19	-0.5
5,026,471	+		Pf6N2E2_4310	0.21	+1.1
5,026,471	+		Pf6N2E2_4310	0.21	-0.5
5,026,472	-		Pf6N2E2_4310	0.21	-0.5
5,026,472	-		Pf6N2E2_4310	0.21	-0.8
5,026,674	+		Pf6N2E2_4310	0.27	-0.9
5,026,674	+		Pf6N2E2_4310	0.27	-0.0
5,026,675	-		Pf6N2E2_4310	0.27	+0.1
5,026,675	-		Pf6N2E2_4310	0.27	+1.1
5,026,865	+		Pf6N2E2_4310	0.32	+0.1
5,026,865	+		Pf6N2E2_4310	0.32	+0.1
5,026,865	+		Pf6N2E2_4310	0.32	-1.0
5,026,865	+		Pf6N2E2_4310	0.32	+0.1
5,026,866	-		Pf6N2E2_4310	0.32	+0.7
5,026,931	-		Pf6N2E2_4310	0.34	-0.2
5,027,023	+		Pf6N2E2_4310	0.37	+1.1
5,027,023	+		Pf6N2E2_4310	0.37	+0.1
5,027,024	-		Pf6N2E2_4310	0.37	-0.3
5,027,024	-		Pf6N2E2_4310	0.37	+0.1
5,027,027	+		Pf6N2E2_4310	0.37	+0.1
5,027,027	+		Pf6N2E2_4310	0.37	+1.1
5,027,027	+		Pf6N2E2_4310	0.37	-0.3
5,027,027	+		Pf6N2E2_4310	0.37	+0.1
5,027,028	-		Pf6N2E2_4310	0.37	-1.2
5,027,028	-		Pf6N2E2_4310	0.37	-0.3
5,027,028	-		Pf6N2E2_4310	0.37	+1.1
5,027,117	-		Pf6N2E2_4310	0.40	+0.1
5,027,231	+		Pf6N2E2_4310	0.43	-0.9
5,027,231	+		Pf6N2E2_4310	0.43	+0.1
5,027,231	+		Pf6N2E2_4310	0.43	-0.3
5,027,232	-		Pf6N2E2_4310	0.43	-0.5
5,027,265	+		Pf6N2E2_4310	0.44	-0.5
5,027,265	+		Pf6N2E2_4310	0.44	+0.7
5,027,266	-		Pf6N2E2_4310	0.44	-0.5
5,027,266	-		Pf6N2E2_4310	0.44	+0.1
5,027,267	+		Pf6N2E2_4310	0.44	+0.1
5,027,268	-		Pf6N2E2_4310	0.44	-1.2
5,027,319	+		Pf6N2E2_4310	0.45	+1.1
5,027,320	-		Pf6N2E2_4310	0.46	+0.1
5,027,372	-		Pf6N2E2_4310	0.47	-2.0
5,027,417	+		Pf6N2E2_4310	0.48	+0.3
5,027,563	+		Pf6N2E2_4310	0.53	+1.1
5,027,564	-		Pf6N2E2_4310	0.53	+1.1
5,027,640	-		Pf6N2E2_4310	0.55	+1.1
5,027,640	-		Pf6N2E2_4310	0.55	-1.2
5,027,750	+		Pf6N2E2_4310	0.58	+0.1
5,027,812	-		Pf6N2E2_4310	0.60	-0.1
5,027,897	+		Pf6N2E2_4310	0.62	-0.4
5,027,897	+		Pf6N2E2_4310	0.62	+0.3
5,027,898	-		Pf6N2E2_4310	0.62	-0.5
5,027,898	-		Pf6N2E2_4310	0.62	+0.7
5,027,898	-		Pf6N2E2_4310	0.62	+0.1
5,027,898	-		Pf6N2E2_4310	0.62	-0.9
5,027,909	+		Pf6N2E2_4310	0.63	+1.1
5,027,910	-		Pf6N2E2_4310	0.63	-0.4
5,027,962	+		Pf6N2E2_4310	0.64	-0.5
5,027,962	+		Pf6N2E2_4310	0.64	+1.1
5,027,963	-		Pf6N2E2_4310	0.64	-0.9
5,028,122	-		Pf6N2E2_4310	0.69	-0.0
5,028,474	+		Pf6N2E2_4310	0.79	-0.2
5,028,488	+		Pf6N2E2_4310	0.79	+0.1
5,028,489	-		Pf6N2E2_4310	0.79	-0.9
5,028,489	-		Pf6N2E2_4310	0.79	-0.9
5,028,525	-		Pf6N2E2_4310	0.81	+0.1
5,028,525	-		Pf6N2E2_4310	0.81	+0.1
5,028,534	-		Pf6N2E2_4310	0.81	-0.7
5,028,631	-		Pf6N2E2_4310	0.84	+1.1
5,028,631	-		Pf6N2E2_4310	0.84	+2.1
5,028,631	-		Pf6N2E2_4310	0.84	-1.1
5,028,653	+		Pf6N2E2_4310	0.84	+0.1
5,028,654	-		Pf6N2E2_4310	0.84	-0.5
5,028,654	-		Pf6N2E2_4310	0.84	+0.1
5,028,689	+		Pf6N2E2_4310	0.85	+0.1
5,028,737	+		Pf6N2E2_4310	0.87	-0.1
5,028,738	-		Pf6N2E2_4310	0.87	+1.1
5,028,810	+		Pf6N2E2_4310	0.89	-0.5
5,028,811	-		Pf6N2E2_4310	0.89	+1.1
5,028,811	-		Pf6N2E2_4310	0.89	+0.1
5,028,811	-		Pf6N2E2_4310	0.89	-0.3
5,028,830	+		Pf6N2E2_4310	0.89	+1.1
5,028,830	+		Pf6N2E2_4310	0.89	+0.1
5,028,831	-		Pf6N2E2_4310	0.89	+0.1
5,028,890	+				+0.1
5,028,922	+				+1.1
5,028,922	+				+1.1
5,028,961	-				-0.5
5,029,055	+				-1.5
5,029,115	+				+0.5
5,029,115	+				+1.1
5,029,116	-				-0.3
5,029,116	-				+0.1
5,029,116	-				+1.1
5,029,116	-				+0.1
5,029,116	-				-1.3
5,029,135	+				+1.1
5,029,213	+				-0.1
5,029,214	-				+0.1
5,029,254	+				+0.3
5,029,255	-				-0.7
5,029,255	-				-0.9
5,029,562	-		Pf6N2E2_4311	0.42	+1.1
5,029,562	-		Pf6N2E2_4311	0.42	-0.5
5,029,562	-		Pf6N2E2_4311	0.42	+1.1
5,029,585	+		Pf6N2E2_4311	0.46	-1.9
5,029,585	+		Pf6N2E2_4311	0.46	+1.1
5,029,585	+		Pf6N2E2_4311	0.46	+1.1
5,029,585	+		Pf6N2E2_4311	0.46	+1.1
5,029,585	+		Pf6N2E2_4311	0.46	+0.1
5,029,586	-		Pf6N2E2_4311	0.46	-0.5
5,029,586	-		Pf6N2E2_4311	0.46	+1.1
5,029,586	-		Pf6N2E2_4311	0.46	+0.1
5,029,586	-		Pf6N2E2_4311	0.46	+1.1
5,029,586	-		Pf6N2E2_4311	0.46	+1.1
5,029,780	+		Pf6N2E2_4311	0.78	+0.2
5,029,780	+		Pf6N2E2_4311	0.78	+1.1
5,029,780	+		Pf6N2E2_4311	0.78	-0.5
5,029,780	+		Pf6N2E2_4311	0.78	+1.1
5,029,780	+		Pf6N2E2_4311	0.78	+1.1
5,029,781	-		Pf6N2E2_4311	0.78	+1.1
5,029,941	+				+1.1
5,029,941	+				-0.8
5,029,941	+				+1.1
5,029,941	+				+1.1
5,029,942	-				-1.3
5,030,011	+		Pf6N2E2_4312	0.10	-0.5
5,030,011	+		Pf6N2E2_4312	0.10	+1.1
5,030,118	+		Pf6N2E2_4312	0.22	+1.1
5,030,119	-		Pf6N2E2_4312	0.22	-0.6